BLASTX nr result

ID: Dioscorea21_contig00039622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039622
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containi...   119   2e-25
emb|CBI33142.3| unnamed protein product [Vitis vinifera]              119   2e-25
ref|XP_002445986.1| hypothetical protein SORBIDRAFT_07g029130 [S...   117   8e-25
ref|XP_003635608.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24
emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]   116   2e-24

>ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 590

 Score =  119 bits (299), Expect = 2e-25
 Identities = 55/85 (64%), Positives = 70/85 (82%)
 Frame = +3

Query: 3   KVNESLYWIDLMGSKYEIAPRPEHYACLVDTLSRAGQLEKAYEYIKQMPFEAEGSVWGAL 182
           KV+ESL W + M   Y+I PRPEH+ACLVD LSR GQ+EKAY+ I++MPFEA+  +WGAL
Sbjct: 415 KVHESLNWFNSMIESYKIVPRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGAL 474

Query: 183 LGACLMYSNVKLGELAAEKLVELDP 257
           L AC ++ NVKLGELAA+K+VEL+P
Sbjct: 475 LAACHVHLNVKLGELAAKKIVELEP 499


>emb|CBI33142.3| unnamed protein product [Vitis vinifera]
          Length = 1198

 Score =  119 bits (299), Expect = 2e-25
 Identities = 55/85 (64%), Positives = 70/85 (82%)
 Frame = +3

Query: 3   KVNESLYWIDLMGSKYEIAPRPEHYACLVDTLSRAGQLEKAYEYIKQMPFEAEGSVWGAL 182
           KV+ESL W + M   Y+I PRPEH+ACLVD LSR GQ+EKAY+ I++MPFEA+  +WGAL
Sbjct: 343 KVHESLNWFNSMIESYKIVPRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGAL 402

Query: 183 LGACLMYSNVKLGELAAEKLVELDP 257
           L AC ++ NVKLGELAA+K+VEL+P
Sbjct: 403 LAACHVHLNVKLGELAAKKIVELEP 427


>ref|XP_002445986.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
           gi|241942336|gb|EES15481.1| hypothetical protein
           SORBIDRAFT_07g029130 [Sorghum bicolor]
          Length = 567

 Score =  117 bits (294), Expect = 8e-25
 Identities = 58/84 (69%), Positives = 67/84 (79%)
 Frame = +3

Query: 3   KVNESLYWIDLMGSKYEIAPRPEHYACLVDTLSRAGQLEKAYEYIKQMPFEAEGSVWGAL 182
           KV+ SL   DLM SKY I+PR EHYAC+VD LSRAGQLEKA  YIK MP EAE +VWG+L
Sbjct: 386 KVDASLKLFDLMSSKYAISPRAEHYACIVDILSRAGQLEKASSYIKDMPLEAEKNVWGSL 445

Query: 183 LGACLMYSNVKLGELAAEKLVELD 254
           LGAC M+ NV+LGELAA+ LV+ D
Sbjct: 446 LGACQMHGNVQLGELAAKMLVQSD 469


>ref|XP_003635608.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 317

 Score =  116 bits (291), Expect = 2e-24
 Identities = 54/85 (63%), Positives = 69/85 (81%)
 Frame = +3

Query: 3   KVNESLYWIDLMGSKYEIAPRPEHYACLVDTLSRAGQLEKAYEYIKQMPFEAEGSVWGAL 182
           KV+ESL W + M   Y+I  RPEH+ACLVD LSR GQ+EKAY+ I++MPFEA+  +WGAL
Sbjct: 142 KVHESLNWFNSMIKSYKIVARPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGAL 201

Query: 183 LGACLMYSNVKLGELAAEKLVELDP 257
           L AC ++ NVKLGELAA+K+VEL+P
Sbjct: 202 LAACHVHLNVKLGELAAKKIVELEP 226


>emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
          Length = 1301

 Score =  116 bits (290), Expect = 2e-24
 Identities = 54/85 (63%), Positives = 69/85 (81%)
 Frame = +3

Query: 3   KVNESLYWIDLMGSKYEIAPRPEHYACLVDTLSRAGQLEKAYEYIKQMPFEAEGSVWGAL 182
           KV+ESL W + M   Y+I  RPEH+ACLVD LSR GQ+EKAY+ I++MPFEA+  +WGAL
Sbjct: 415 KVHESLNWFNSMIXSYKIVXRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGAL 474

Query: 183 LGACLMYSNVKLGELAAEKLVELDP 257
           L AC ++ NVKLGELAA+K+VEL+P
Sbjct: 475 LAACHVHLNVKLGELAAKKIVELEP 499


Top