BLASTX nr result

ID: Dioscorea21_contig00039616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039616
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327147.1| glutamate-gated kainate-type ion channel rec...    67   2e-09
dbj|BAL15046.1| glutamate receptor 1.1 [Solanum lycopersicum]          65   8e-09
emb|CBI30649.3| unnamed protein product [Vitis vinifera]               64   1e-08
ref|XP_002272216.1| PREDICTED: glutamate receptor 2.7-like [Viti...    64   1e-08
ref|XP_002283294.2| PREDICTED: glutamate receptor 2.7-like [Viti...    62   5e-08

>ref|XP_002327147.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222835462|gb|EEE73897.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 765

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
 Frame = -1

Query: 252 SKYLIKYLENVIHFPSQNIRKIMKIEDYHNAFQSGKINAAFMELPYMRLFLSLY-KDYTI 76
           + ++++YL NV+ F  +NI+KI  I DY  AF++G + AAF   P+ R+FL  Y K YT 
Sbjct: 576 NSFIVRYLINVLLFKPENIKKINSIHDYPEAFETGYVKAAFFVEPHARVFLGKYCKGYTK 635

Query: 75  YGESQKFGGFGIV 37
            G + K GGFG V
Sbjct: 636 AGPTLKLGGFGFV 648


>dbj|BAL15046.1| glutamate receptor 1.1 [Solanum lycopersicum]
          Length = 913

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
 Frame = -1

Query: 246 YLIKYLENVIHFPSQNIRKIMKIEDYHNAFQSGKINAAFMELPYMRLFLSLY-KDYTIYG 70
           ++IKYL N + F  +NI++I  I DY NAF+ G+I+AAF  +P+ ++FL+ + K YT  G
Sbjct: 705 FIIKYLVN-LQFKPENIKEISSINDYPNAFEKGEISAAFFVVPHAKVFLAKFCKGYTKSG 763

Query: 69  ESQKFGGFGIV 37
              K GGFG V
Sbjct: 764 PVYKLGGFGFV 774


>emb|CBI30649.3| unnamed protein product [Vitis vinifera]
          Length = 924

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = -1

Query: 246 YLIKYLENVIHFPSQNIRKIMKIEDYHNAFQSGKINAAFMELPYMRLFLSLY-KDYTIYG 70
           ++ KYLE+V+ F   NI+ I     Y N FQ G I+AAF+ELPY ++F++ Y K YT   
Sbjct: 704 FVRKYLEDVLDFKKDNIKNISSQYAYPNEFQKGTISAAFLELPYEKVFMNRYCKKYTASN 763

Query: 69  ESQKFGGFGIV 37
              +FGG G V
Sbjct: 764 PLSRFGGLGFV 774


>ref|XP_002272216.1| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 916

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = -1

Query: 246 YLIKYLENVIHFPSQNIRKIMKIEDYHNAFQSGKINAAFMELPYMRLFLSLY-KDYTIYG 70
           ++ KYLE+V+ F   NI+ I     Y N FQ G I+AAF+ELPY ++F++ Y K YT   
Sbjct: 696 FVRKYLEDVLDFKKDNIKNISSQYAYPNEFQKGTISAAFLELPYEKVFMNRYCKKYTASN 755

Query: 69  ESQKFGGFGIV 37
              +FGG G V
Sbjct: 756 PLSRFGGLGFV 766


>ref|XP_002283294.2| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 781

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
 Frame = -1

Query: 246 YLIKYLENVIHFPSQNIRKIMKIEDYHNAFQSGKINAAFMELPYMRLFLSLY-KDYTIYG 70
           ++ KYLENVI F   +I+ I     Y   FQSG I+AAF+ELPY ++F++ + K+YT   
Sbjct: 638 FVRKYLENVIKFKGADIKNISNQYQYPGEFQSGNISAAFLELPYAKVFINQFCKNYTANQ 697

Query: 69  ESQKFGGFG 43
              +FGG G
Sbjct: 698 PLNRFGGLG 706


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