BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039612
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O48653.2|DPOLA_ORYSJ RecName: Full=DNA polymerase alpha catal...    89   4e-16
gb|EEC71866.1| hypothetical protein OsI_04575 [Oryza sativa Indi...    89   4e-16
dbj|BAD81999.1| putative DNA polymerase alpha catalytic subunit ...    89   4e-16
ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic su...    88   6e-16
ref|XP_003567311.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...    88   8e-16

>sp|O48653.2|DPOLA_ORYSJ RecName: Full=DNA polymerase alpha catalytic subunit
          Length = 1534

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 52/117 (44%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
 Frame = +1

Query: 1   EYAALVARRREETRDFIVDDDGLGYVDEGQEEDWSHPSHSFSSDEEYPPSNDGLXXXXXX 180
           +YAALVARRR++   FIVDDDGLGY D+G+EEDW+H +   SSDE     +         
Sbjct: 62  DYAALVARRRKDAGAFIVDDDGLGYADDGREEDWTHRTIHSSSDEGSDGEDGAPRKRKQP 121

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXMGKQRLSSMFTSSVFKK--NERTKGTGLSTDSIV 345
                                  MGKQRLSSMFTSSVF+K  ++R + + L+ DSIV
Sbjct: 122 RPQSKRPPQQSAAAASLSAAAAMMGKQRLSSMFTSSVFRKPGSDRGRDSSLAADSIV 178


>gb|EEC71866.1| hypothetical protein OsI_04575 [Oryza sativa Indica Group]
          Length = 1532

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 52/117 (44%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
 Frame = +1

Query: 1   EYAALVARRREETRDFIVDDDGLGYVDEGQEEDWSHPSHSFSSDEEYPPSNDGLXXXXXX 180
           +YAALVARRR++   FIVDDDGLGY D+G+EEDW+H +   SSDE     +         
Sbjct: 62  DYAALVARRRKDAGAFIVDDDGLGYADDGREEDWTHRTIHSSSDEGSDGEDGAPRKRKQP 121

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXMGKQRLSSMFTSSVFKK--NERTKGTGLSTDSIV 345
                                  MGKQRLSSMFTSSVF+K  ++R + + L+ DSIV
Sbjct: 122 RPQSKRPPQQSAAAASLSAAAAMMGKQRLSSMFTSSVFRKPGSDRGRDSSLAADSIV 178


>dbj|BAD81999.1| putative DNA polymerase alpha catalytic subunit [Oryza sativa
           Japonica Group]
          Length = 1532

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 52/117 (44%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
 Frame = +1

Query: 1   EYAALVARRREETRDFIVDDDGLGYVDEGQEEDWSHPSHSFSSDEEYPPSNDGLXXXXXX 180
           +YAALVARRR++   FIVDDDGLGY D+G+EEDW+H +   SSDE     +         
Sbjct: 62  DYAALVARRRKDAGAFIVDDDGLGYADDGREEDWTHRTIHSSSDEGSDGEDGAPRKRKQP 121

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXMGKQRLSSMFTSSVFKK--NERTKGTGLSTDSIV 345
                                  MGKQRLSSMFTSSVF+K  ++R + + L+ DSIV
Sbjct: 122 RPQSKRPPQQSAAAASLSAAAAMMGKQRLSSMFTSSVFRKPGSDRGRDSSLAADSIV 178


>ref|XP_004169620.1| PREDICTED: DNA polymerase alpha catalytic subunit-like, partial
           [Cucumis sativus]
          Length = 498

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 55/116 (47%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
 Frame = +1

Query: 1   EYAALVARRREETRDFIVDDDGLGYVDEGQEEDWSHPSHSFSSDEEYPPSNDGLXXXXXX 180
           EY ALVA+RREE R FIVDDDGLGY DEG+EEDWS     FS +     S+  L      
Sbjct: 60  EYDALVAKRREEVRGFIVDDDGLGYGDEGEEEDWSKAGVCFSDE-----SDGELDKPKKR 114

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXMGKQRLSSMFTSSVFKKNER-TKGTGLSTDSIV 345
                                  MGKQ+LSSMFTSS+F+K  R  K  GL  DSIV
Sbjct: 115 KVVKKETQPKKPSSSSLTAAAAMMGKQKLSSMFTSSIFRKTGRDDKAKGLGCDSIV 170


>ref|XP_003567311.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase alpha catalytic
           subunit-like [Brachypodium distachyon]
          Length = 1538

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 57/119 (47%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
 Frame = +1

Query: 1   EYAALVARRREETRDFIVDDDGLGYVDEGQEEDWSHPSHSFSSDEEYPPSNDGL--XXXX 174
           +YAALVARRR++   FI+DDDGLGYVD+G+EEDW+H +   SSDE      DG       
Sbjct: 62  DYAALVARRRKDAGAFIIDDDGLGYVDDGREEDWTHRALPSSSDEG-SDGEDGASRKRKQ 120

Query: 175 XXXXXXXXXXXXXXXXXXXXXXXXXMGKQRLSSMFTSSVFKK--NERTKGTGLSTDSIV 345
                                    MGKQRLSSMFTSSVFKK  ++RTKG+  + DSIV
Sbjct: 121 PRPPQAKRPPQQSAAAASLSAAAAMMGKQRLSSMFTSSVFKKPGSDRTKGSP-AADSIV 178