BLASTX nr result

ID: Dioscorea21_contig00039610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039610
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535139.1| conserved hypothetical protein [Ricinus comm...   130   1e-28
tpg|DAA42763.1| TPA: hypothetical protein ZEAMMB73_123667 [Zea m...   129   3e-28
emb|CBI31105.3| unnamed protein product [Vitis vinifera]              128   6e-28
ref|XP_002526582.1| conserved hypothetical protein [Ricinus comm...    80   2e-13

>ref|XP_002535139.1| conserved hypothetical protein [Ricinus communis]
           gi|223523944|gb|EEF27245.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 89

 Score =  130 bits (327), Expect = 1e-28
 Identities = 71/119 (59%), Positives = 73/119 (61%)
 Frame = +1

Query: 43  MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVRLRCGKAPPCCASSQLRRVSLVILIKPQP 222
           MGRQWS GKLVLILDAVHWNPEAPPRTLPRVRLR                          
Sbjct: 1   MGRQWSTGKLVLILDAVHWNPEAPPRTLPRVRLR-------------------------- 34

Query: 223 *CLASQLVDGSFSPRSMKKGEVSFFFRRTGSEALCRGEGTGKETVPKKDIGVPNASPRP 399
                          SMKKGE S FFR+TGSEALCRG GTGKET PKK+IGVPNASPRP
Sbjct: 35  ---------------SMKKGEESGFFRKTGSEALCRGGGTGKETAPKKEIGVPNASPRP 78


>tpg|DAA42763.1| TPA: hypothetical protein ZEAMMB73_123667 [Zea mays]
          Length = 60

 Score =  129 bits (323), Expect = 3e-28
 Identities = 60/60 (100%), Positives = 60/60 (100%)
 Frame = +1

Query: 43  MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVRLRCGKAPPCCASSQLRRVSLVILIKPQP 222
           MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVRLRCGKAPPCCASSQLRRVSLVILIKPQP
Sbjct: 1   MGRQWSAGKLVLILDAVHWNPEAPPRTLPRVRLRCGKAPPCCASSQLRRVSLVILIKPQP 60


>emb|CBI31105.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  128 bits (321), Expect = 6e-28
 Identities = 62/71 (87%), Positives = 64/71 (90%)
 Frame = -1

Query: 386 ALGTPISFFGTVSFPVPSPRHSASLPVLRKKKLTSPFFIDLGEKEPSTSWEARHQGCGLM 207
           +LGTPISFFG VSFPVP PRHSASLPVLRK +LTSPFFIDLGEKEPSTSWEARHQ  GLM
Sbjct: 287 SLGTPISFFGAVSFPVPPPRHSASLPVLRKNQLTSPFFIDLGEKEPSTSWEARHQVSGLM 346

Query: 206 RITKLTRRSWL 174
            ITKLT RSWL
Sbjct: 347 SITKLTCRSWL 357


>ref|XP_002526582.1| conserved hypothetical protein [Ricinus communis]
           gi|223534076|gb|EEF35794.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 54

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/43 (86%), Positives = 39/43 (90%)
 Frame = +1

Query: 271 MKKGEVSFFFRRTGSEALCRGEGTGKETVPKKDIGVPNASPRP 399
           MKKGE S FFR+TGSEALCRG GTGKET PKK+IGVPNASPRP
Sbjct: 1   MKKGEESGFFRKTGSEALCRGGGTGKETAPKKEIGVPNASPRP 43


Top