BLASTX nr result

ID: Dioscorea21_contig00039581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039581
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541002.1| PREDICTED: cyclic nucleotide-gated ion chann...   164   5e-39
ref|XP_003526201.1| PREDICTED: cyclic nucleotide-gated ion chann...   164   5e-39
ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|2...   162   2e-38
ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putativ...   162   3e-38
ref|NP_001190536.1| cyclic nucleotide-gated ion channel 4 [Arabi...   162   3e-38

>ref|XP_003541002.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Glycine max]
          Length = 690

 Score =  164 bits (416), Expect = 5e-39
 Identities = 80/109 (73%), Positives = 86/109 (78%)
 Frame = +1

Query: 4   LFTKTNRAEKILLPIFWGLMTLSTFGTLESTTEWLEIVFNIIIVTSGLLLVTMLIGNIKV 183
           L T  NR EKIL PIFWGLMTLSTFG LESTTEWLE+VFNII++TSGLLLVTMLIGNIKV
Sbjct: 353 LVTNDNRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKV 412

Query: 184 FLHTTTSKKQALHLKMRSLEWWMXXXXXXXXXXXXXXQYERQRWAAMRG 330
           FLH TTSKKQA+ LKMR++EWWM               YERQRWAAMRG
Sbjct: 413 FLHATTSKKQAMQLKMRNIEWWMRKRRLPLGFRQRVRNYERQRWAAMRG 461


>ref|XP_003526201.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Glycine max]
          Length = 691

 Score =  164 bits (416), Expect = 5e-39
 Identities = 80/109 (73%), Positives = 86/109 (78%)
 Frame = +1

Query: 4   LFTKTNRAEKILLPIFWGLMTLSTFGTLESTTEWLEIVFNIIIVTSGLLLVTMLIGNIKV 183
           L T  NR EKIL PIFWGLMTLSTFG LESTTEWLE+VFNII++TSGLLLVTMLIGNIKV
Sbjct: 354 LVTNDNRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKV 413

Query: 184 FLHTTTSKKQALHLKMRSLEWWMXXXXXXXXXXXXXXQYERQRWAAMRG 330
           FLH TTSKKQA+ LKMR++EWWM               YERQRWAAMRG
Sbjct: 414 FLHATTSKKQAMQLKMRNIEWWMRKRRLPLGFRQRVRNYERQRWAAMRG 462


>ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|222871805|gb|EEF08936.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score =  162 bits (411), Expect = 2e-38
 Identities = 79/109 (72%), Positives = 86/109 (78%)
 Frame = +1

Query: 4   LFTKTNRAEKILLPIFWGLMTLSTFGTLESTTEWLEIVFNIIIVTSGLLLVTMLIGNIKV 183
           L T  +R EKIL PIFWGLMTLSTFG LESTTEWLE+VFNII++TSGLLLVTMLIGNIKV
Sbjct: 298 LVTNDSRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKV 357

Query: 184 FLHTTTSKKQALHLKMRSLEWWMXXXXXXXXXXXXXXQYERQRWAAMRG 330
           FLH TTSKKQA+ LKMR++EWWM               YERQRWAAMRG
Sbjct: 358 FLHATTSKKQAMQLKMRNIEWWMRKRHLPTGFRQRVRNYERQRWAAMRG 406


>ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223534910|gb|EEF36596.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 687

 Score =  162 bits (410), Expect = 3e-38
 Identities = 79/109 (72%), Positives = 86/109 (78%)
 Frame = +1

Query: 4   LFTKTNRAEKILLPIFWGLMTLSTFGTLESTTEWLEIVFNIIIVTSGLLLVTMLIGNIKV 183
           L T  +R EKIL PIFWGLMTLSTFG LESTTEWLE+VFNII++TSGLLLVTMLIGNIKV
Sbjct: 350 LVTNGSRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKV 409

Query: 184 FLHTTTSKKQALHLKMRSLEWWMXXXXXXXXXXXXXXQYERQRWAAMRG 330
           FLH TTSKKQA+ LKMR++EWWM               YERQRWAAMRG
Sbjct: 410 FLHATTSKKQAMQLKMRNIEWWMRKRRLPPEFRHRVRNYERQRWAAMRG 458


>ref|NP_001190536.1| cyclic nucleotide-gated ion channel 4 [Arabidopsis thaliana]
           gi|332009092|gb|AED96475.1| cyclic nucleotide-gated ion
           channel 4 [Arabidopsis thaliana]
          Length = 689

 Score =  162 bits (409), Expect = 3e-38
 Identities = 78/109 (71%), Positives = 86/109 (78%)
 Frame = +1

Query: 4   LFTKTNRAEKILLPIFWGLMTLSTFGTLESTTEWLEIVFNIIIVTSGLLLVTMLIGNIKV 183
           L +  +R EKIL PIFWGLMTLSTFG LESTTEW E+VFNII++TSGLLLVTMLIGNIKV
Sbjct: 356 LVSSESRLEKILFPIFWGLMTLSTFGNLESTTEWSEVVFNIIVLTSGLLLVTMLIGNIKV 415

Query: 184 FLHTTTSKKQALHLKMRSLEWWMXXXXXXXXXXXXXXQYERQRWAAMRG 330
           FLH TTSKKQA+HLKMR++EWWM               YERQRWAAMRG
Sbjct: 416 FLHATTSKKQAMHLKMRNIEWWMKKRHLPIGFRQRVRNYERQRWAAMRG 464


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