BLASTX nr result

ID: Dioscorea21_contig00039562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039562
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325552.1| white-brown-complex ABC transporter family [...    70   2e-10
ref|XP_002888855.1| hypothetical protein ARALYDRAFT_476326 [Arab...    69   3e-10
ref|XP_002327338.1| white-brown-complex ABC transporter family [...    69   3e-10
ref|NP_565030.1| ABC transporter G family member 25 [Arabidopsis...    69   4e-10
gb|AAK92745.1| putative ABC transporter protein [Arabidopsis tha...    69   4e-10

>ref|XP_002325552.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222862427|gb|EEE99933.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 648

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/68 (51%), Positives = 44/68 (64%)
 Frame = +3

Query: 27  CLPITLKFKDISVHVKLXXXXXXXXXXFRRLLGQKPARNEEQEERTILNGITGMVSPGEM 206
           C PITLKF D+   VK            +R+ G  P  +++ +ERTILNGITGM SPGE+
Sbjct: 27  CYPITLKFMDVGYRVKFENKNKGSN--IKRIFGHGPTISDQFQERTILNGITGMASPGEI 84

Query: 207 MAILGPSG 230
           +AILGPSG
Sbjct: 85  LAILGPSG 92


>ref|XP_002888855.1| hypothetical protein ARALYDRAFT_476326 [Arabidopsis lyrata subsp.
           lyrata] gi|297334696|gb|EFH65114.1| hypothetical protein
           ARALYDRAFT_476326 [Arabidopsis lyrata subsp. lyrata]
          Length = 661

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
 Frame = +3

Query: 18  STPCLPITLKFKDISVHVKLXXXXXXXXXXFRRLLGQKPARNEEQ---EERTILNGITGM 188
           S+ C PITLKF D+   VK+          F++ LG K   ++E    EERTIL+G+TGM
Sbjct: 31  SSSCFPITLKFVDVCYRVKINGMSSDSCN-FKKFLGLKHQPSDETRSTEERTILSGVTGM 89

Query: 189 VSPGEMMAILGPSG 230
           +SPGE MA+LGPSG
Sbjct: 90  ISPGEFMAVLGPSG 103


>ref|XP_002327338.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222835708|gb|EEE74143.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 652

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/68 (50%), Positives = 45/68 (66%)
 Frame = +3

Query: 27  CLPITLKFKDISVHVKLXXXXXXXXXXFRRLLGQKPARNEEQEERTILNGITGMVSPGEM 206
           C PITLKF ++   VK            +R+LG +P   ++ +ERTILNGITGM SPGE+
Sbjct: 40  CYPITLKFMEVGYRVKFENRNKGSN--IKRILGHEPTICDQIQERTILNGITGMASPGEI 97

Query: 207 MAILGPSG 230
           +A+LGPSG
Sbjct: 98  LAVLGPSG 105


>ref|NP_565030.1| ABC transporter G family member 25 [Arabidopsis thaliana]
           gi|75328103|sp|Q84TH5.1|AB25G_ARATH RecName: Full=ABC
           transporter G family member 25; Short=ABC transporter
           ABCG.25; Short=AtABCG25; AltName: Full=White-brown
           complex homolog protein 26; Short=AtWBC26
           gi|28973763|gb|AAO64197.1| putative ABC transporter
           protein [Arabidopsis thaliana]
           gi|332197137|gb|AEE35258.1| ABC transporter G family
           member 25 [Arabidopsis thaliana]
          Length = 662

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
 Frame = +3

Query: 18  STPCLPITLKFKDISVHVKLXXXXXXXXXXFRRLLGQKPARNEEQ---EERTILNGITGM 188
           S+ C PITLKF D+   VK+           ++LLG K   ++E    EERTIL+G+TGM
Sbjct: 32  SSSCFPITLKFVDVCYRVKIHGMSNDSCN-IKKLLGLKQKPSDETRSTEERTILSGVTGM 90

Query: 189 VSPGEMMAILGPSG 230
           +SPGE MA+LGPSG
Sbjct: 91  ISPGEFMAVLGPSG 104


>gb|AAK92745.1| putative ABC transporter protein [Arabidopsis thaliana]
          Length = 662

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
 Frame = +3

Query: 18  STPCLPITLKFKDISVHVKLXXXXXXXXXXFRRLLGQKPARNEEQ---EERTILNGITGM 188
           S+ C PITLKF D+   VK+           ++LLG K   ++E    EERTIL+G+TGM
Sbjct: 32  SSSCFPITLKFVDVCYRVKIHGMSNDSCN-IKKLLGLKQKPSDETRSTEERTILSGVTGM 90

Query: 189 VSPGEMMAILGPSG 230
           +SPGE MA+LGPSG
Sbjct: 91  ISPGEFMAVLGPSG 104


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