BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039549
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533676.1| pentatricopeptide repeat-containing protein,...    61   8e-08
ref|XP_003601206.1| hypothetical protein MTR_3g077200 [Medicago ...    61   1e-07
ref|XP_002301563.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containi...    59   5e-07
ref|XP_003551036.1| PREDICTED: pentatricopeptide repeat-containi...    58   9e-07

>ref|XP_002533676.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526427|gb|EEF28706.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 726

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
 Frame = -1

Query: 260 LPQLHARLIKTNTFHNN--FYLSKILSLYIHHNXXXXXXXXLHRAKKPNTLVWNTLLKAY 87
           L Q+HA L+ +  F+ +  F  +K++S Y   N            ++PNTL WN +++ +
Sbjct: 44  LKQIHASLLVSTGFNESISFPSTKLISFYSKFNDLESAISVFSLLQEPNTLSWNLIMRTH 103

Query: 86  SDHGLFSDSLLLFRLMLQSGVRPDCYTF 3
            D GL +++LLL++ M +SGV+ D +TF
Sbjct: 104 LDFGLVTEALLLYKKMRESGVKTDAFTF 131


>ref|XP_003601206.1| hypothetical protein MTR_3g077200 [Medicago truncatula]
           gi|355490254|gb|AES71457.1| hypothetical protein
           MTR_3g077200 [Medicago truncatula]
          Length = 553

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/84 (33%), Positives = 49/84 (58%)
 Frame = -1

Query: 254 QLHARLIKTNTFHNNFYLSKILSLYIHHNXXXXXXXXLHRAKKPNTLVWNTLLKAYSDHG 75
           QLHA L+KT+   + FY ++I+ LY  +N          +    +  +WN++++A++   
Sbjct: 24  QLHACLLKTHLSKDPFYATQIIRLYAFNNHINYAHHVFDKTSTRSVFLWNSMIRAFAKAR 83

Query: 74  LFSDSLLLFRLMLQSGVRPDCYTF 3
            FS+++ LFR ML   +RPD YT+
Sbjct: 84  RFSNAISLFRTMLVDDIRPDNYTY 107


>ref|XP_002301563.1| predicted protein [Populus trichocarpa] gi|222843289|gb|EEE80836.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/88 (29%), Positives = 47/88 (53%)
 Frame = -1

Query: 266 SHLPQLHARLIKTNTFHNNFYLSKILSLYIHHNXXXXXXXXLHRAKKPNTLVWNTLLKAY 87
           +HL  +H ++I+     N   + K++ L   +          H+ ++P+T  WN L++ Y
Sbjct: 54  NHLKLVHGKIIRNALSANQLLVRKLIHLCSSYGRLDYAALLFHQVQEPHTFTWNFLIRTY 113

Query: 86  SDHGLFSDSLLLFRLMLQSGVRPDCYTF 3
           + HG    +LLL+ LM++ G  PD +TF
Sbjct: 114 TIHGYSMKALLLYNLMIRRGFPPDKFTF 141


>ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 739

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/86 (33%), Positives = 50/86 (58%)
 Frame = -1

Query: 260 LPQLHARLIKTNTFHNNFYLSKILSLYIHHNXXXXXXXXLHRAKKPNTLVWNTLLKAYSD 81
           L ++HA LI ++ F      SK+++LY   N         +  ++PNT++WN+++K++ D
Sbjct: 67  LKRIHASLIVSSGFQPLSVASKLITLYSQLNDFRSAFSICNSFEEPNTVIWNSIIKSHVD 126

Query: 80  HGLFSDSLLLFRLMLQSGVRPDCYTF 3
            GLF  +LL +  M + GV  D +TF
Sbjct: 127 SGLFGYALLQYGRMRELGVAHDSFTF 152


>ref|XP_003551036.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Glycine max]
          Length = 619

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/84 (30%), Positives = 46/84 (54%)
 Frame = -1

Query: 254 QLHARLIKTNTFHNNFYLSKILSLYIHHNXXXXXXXXLHRAKKPNTLVWNTLLKAYSDHG 75
           QLH R++ T + HN+F+++K++ +Y   N        LH+   PN   + ++L  +S HG
Sbjct: 23  QLHHRILLTGSHHNHFFVTKLIQIYADSNDLRSAVTLLHQISHPNVFAFTSILSFHSRHG 82

Query: 74  LFSDSLLLFRLMLQSGVRPDCYTF 3
           L    +  +  + ++GV PD Y F
Sbjct: 83  LGHQCIQTYAELRRNGVVPDGYVF 106