BLASTX nr result
ID: Dioscorea21_contig00039538
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00039538 (264 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003574278.1| PREDICTED: LOW QUALITY PROTEIN: hippocampus ... 122 2e-26 dbj|BAJ86597.1| predicted protein [Hordeum vulgare subsp. vulgare] 119 2e-25 ref|XP_003523261.1| PREDICTED: hippocampus abundant transcript-l... 108 3e-22 ref|XP_002306959.1| predicted protein [Populus trichocarpa] gi|2... 108 3e-22 ref|XP_002301947.1| predicted protein [Populus trichocarpa] gi|2... 108 3e-22 >ref|XP_003574278.1| PREDICTED: LOW QUALITY PROTEIN: hippocampus abundant transcript 1 protein-like [Brachypodium distachyon] Length = 437 Score = 122 bits (307), Expect = 2e-26 Identities = 58/77 (75%), Positives = 65/77 (84%) Frame = +2 Query: 2 PCIRSIVSKKVGSDEQGMAQGCITGIASVASILSPFVFTPLTVLFLSDNPPFNFKGFSIM 181 PCIRSIVSKKVG EQGM QGCITGI+S AS++SP VFTPLT FLS+N PFNFKGFS+ Sbjct: 352 PCIRSIVSKKVGPSEQGMVQGCITGISSTASVISPLVFTPLTAWFLSENAPFNFKGFSLA 411 Query: 182 CSGFSTLAAFTLSIMMR 232 C+GF+TL A TLSI MR Sbjct: 412 CAGFATLVALTLSINMR 428 >dbj|BAJ86597.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 381 Score = 119 bits (299), Expect = 2e-25 Identities = 56/77 (72%), Positives = 64/77 (83%) Frame = +2 Query: 2 PCIRSIVSKKVGSDEQGMAQGCITGIASVASILSPFVFTPLTVLFLSDNPPFNFKGFSIM 181 PCIRSIVSKKVG EQGM QGCITGI+S AS++SP VFTPLT FLS+ PFNFKGFS+ Sbjct: 296 PCIRSIVSKKVGPSEQGMVQGCITGISSTASVISPLVFTPLTAWFLSETAPFNFKGFSLA 355 Query: 182 CSGFSTLAAFTLSIMMR 232 C+GF+TL A T+SI MR Sbjct: 356 CAGFATLVALTMSINMR 372 >ref|XP_003523261.1| PREDICTED: hippocampus abundant transcript-like protein 1-like [Glycine max] Length = 432 Score = 108 bits (271), Expect = 3e-22 Identities = 52/84 (61%), Positives = 66/84 (78%) Frame = +2 Query: 2 PCIRSIVSKKVGSDEQGMAQGCITGIASVASILSPFVFTPLTVLFLSDNPPFNFKGFSIM 181 PCIRSIVSK+ G EQG AQGCI+GI S+A I+SP VF+PLT LFLS+ PF+F GFSIM Sbjct: 349 PCIRSIVSKEAGPHEQGKAQGCISGICSIAHIVSPLVFSPLTALFLSEKAPFDFPGFSIM 408 Query: 182 CSGFSTLAAFTLSIMMRDITEPIL 253 C GF+++ +F S+M+R + PIL Sbjct: 409 CIGFASMISFVQSLMLR-VAPPIL 431 >ref|XP_002306959.1| predicted protein [Populus trichocarpa] gi|222856408|gb|EEE93955.1| predicted protein [Populus trichocarpa] Length = 447 Score = 108 bits (271), Expect = 3e-22 Identities = 53/87 (60%), Positives = 69/87 (79%) Frame = +2 Query: 2 PCIRSIVSKKVGSDEQGMAQGCITGIASVASILSPFVFTPLTVLFLSDNPPFNFKGFSIM 181 PC+RSIVSK+VGS EQG AQGCI+GI+S A+++SP +F+PLT LFLS+ PF+F GFSIM Sbjct: 353 PCMRSIVSKQVGSCEQGKAQGCISGISSFANVISPLLFSPLTALFLSERAPFHFPGFSIM 412 Query: 182 CSGFSTLAAFTLSIMMRDITEPILYSK 262 C GF+++ AF S+M+R I PI K Sbjct: 413 CVGFASMIAFIQSLMIR-IAPPIANEK 438 >ref|XP_002301947.1| predicted protein [Populus trichocarpa] gi|222843673|gb|EEE81220.1| predicted protein [Populus trichocarpa] Length = 425 Score = 108 bits (271), Expect = 3e-22 Identities = 51/77 (66%), Positives = 64/77 (83%) Frame = +2 Query: 2 PCIRSIVSKKVGSDEQGMAQGCITGIASVASILSPFVFTPLTVLFLSDNPPFNFKGFSIM 181 PC+RSIVSK+VGS EQG AQGCI+GI+S A+++SP VF+PLT LFLS+ PF F GFSIM Sbjct: 331 PCMRSIVSKQVGSCEQGKAQGCISGISSFANVISPLVFSPLTALFLSERAPFPFPGFSIM 390 Query: 182 CSGFSTLAAFTLSIMMR 232 C GF+++ AF S+MMR Sbjct: 391 CVGFASMIAFIQSLMMR 407