BLASTX nr result

ID: Dioscorea21_contig00039538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039538
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003574278.1| PREDICTED: LOW QUALITY PROTEIN: hippocampus ...   122   2e-26
dbj|BAJ86597.1| predicted protein [Hordeum vulgare subsp. vulgare]    119   2e-25
ref|XP_003523261.1| PREDICTED: hippocampus abundant transcript-l...   108   3e-22
ref|XP_002306959.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22
ref|XP_002301947.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22

>ref|XP_003574278.1| PREDICTED: LOW QUALITY PROTEIN: hippocampus abundant transcript 1
           protein-like [Brachypodium distachyon]
          Length = 437

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/77 (75%), Positives = 65/77 (84%)
 Frame = +2

Query: 2   PCIRSIVSKKVGSDEQGMAQGCITGIASVASILSPFVFTPLTVLFLSDNPPFNFKGFSIM 181
           PCIRSIVSKKVG  EQGM QGCITGI+S AS++SP VFTPLT  FLS+N PFNFKGFS+ 
Sbjct: 352 PCIRSIVSKKVGPSEQGMVQGCITGISSTASVISPLVFTPLTAWFLSENAPFNFKGFSLA 411

Query: 182 CSGFSTLAAFTLSIMMR 232
           C+GF+TL A TLSI MR
Sbjct: 412 CAGFATLVALTLSINMR 428


>dbj|BAJ86597.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 381

 Score =  119 bits (299), Expect = 2e-25
 Identities = 56/77 (72%), Positives = 64/77 (83%)
 Frame = +2

Query: 2   PCIRSIVSKKVGSDEQGMAQGCITGIASVASILSPFVFTPLTVLFLSDNPPFNFKGFSIM 181
           PCIRSIVSKKVG  EQGM QGCITGI+S AS++SP VFTPLT  FLS+  PFNFKGFS+ 
Sbjct: 296 PCIRSIVSKKVGPSEQGMVQGCITGISSTASVISPLVFTPLTAWFLSETAPFNFKGFSLA 355

Query: 182 CSGFSTLAAFTLSIMMR 232
           C+GF+TL A T+SI MR
Sbjct: 356 CAGFATLVALTMSINMR 372


>ref|XP_003523261.1| PREDICTED: hippocampus abundant transcript-like protein 1-like
           [Glycine max]
          Length = 432

 Score =  108 bits (271), Expect = 3e-22
 Identities = 52/84 (61%), Positives = 66/84 (78%)
 Frame = +2

Query: 2   PCIRSIVSKKVGSDEQGMAQGCITGIASVASILSPFVFTPLTVLFLSDNPPFNFKGFSIM 181
           PCIRSIVSK+ G  EQG AQGCI+GI S+A I+SP VF+PLT LFLS+  PF+F GFSIM
Sbjct: 349 PCIRSIVSKEAGPHEQGKAQGCISGICSIAHIVSPLVFSPLTALFLSEKAPFDFPGFSIM 408

Query: 182 CSGFSTLAAFTLSIMMRDITEPIL 253
           C GF+++ +F  S+M+R +  PIL
Sbjct: 409 CIGFASMISFVQSLMLR-VAPPIL 431


>ref|XP_002306959.1| predicted protein [Populus trichocarpa] gi|222856408|gb|EEE93955.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score =  108 bits (271), Expect = 3e-22
 Identities = 53/87 (60%), Positives = 69/87 (79%)
 Frame = +2

Query: 2   PCIRSIVSKKVGSDEQGMAQGCITGIASVASILSPFVFTPLTVLFLSDNPPFNFKGFSIM 181
           PC+RSIVSK+VGS EQG AQGCI+GI+S A+++SP +F+PLT LFLS+  PF+F GFSIM
Sbjct: 353 PCMRSIVSKQVGSCEQGKAQGCISGISSFANVISPLLFSPLTALFLSERAPFHFPGFSIM 412

Query: 182 CSGFSTLAAFTLSIMMRDITEPILYSK 262
           C GF+++ AF  S+M+R I  PI   K
Sbjct: 413 CVGFASMIAFIQSLMIR-IAPPIANEK 438


>ref|XP_002301947.1| predicted protein [Populus trichocarpa] gi|222843673|gb|EEE81220.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score =  108 bits (271), Expect = 3e-22
 Identities = 51/77 (66%), Positives = 64/77 (83%)
 Frame = +2

Query: 2   PCIRSIVSKKVGSDEQGMAQGCITGIASVASILSPFVFTPLTVLFLSDNPPFNFKGFSIM 181
           PC+RSIVSK+VGS EQG AQGCI+GI+S A+++SP VF+PLT LFLS+  PF F GFSIM
Sbjct: 331 PCMRSIVSKQVGSCEQGKAQGCISGISSFANVISPLVFSPLTALFLSERAPFPFPGFSIM 390

Query: 182 CSGFSTLAAFTLSIMMR 232
           C GF+++ AF  S+MMR
Sbjct: 391 CVGFASMIAFIQSLMMR 407


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