BLASTX nr result

ID: Dioscorea21_contig00039148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039148
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]               84   2e-14
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...    83   2e-14
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]    83   3e-14
emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera]    83   3e-14
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]    83   3e-14

>gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]
          Length = 2037

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 37/77 (48%), Positives = 56/77 (72%)
 Frame = -2

Query: 234  VRVRELREIYESCSFALSMTEPESFEEAQQSYVWKQAMQDEITAIQKNNTWKLTELPQGK 55
            ++VR L ++YE C+   +  +P S+ EA +   W  A++ EI +I++N TWKLTELPQ K
Sbjct: 1256 LKVRPLSDVYERCNPVYA--KPTSYTEAARFPAWIDAIKSEIDSIERNGTWKLTELPQNK 1313

Query: 54   KKIGLKWVFRTKYKPNG 4
            K+IG+KWVF+TK+ P+G
Sbjct: 1314 KEIGVKWVFKTKFNPDG 1330


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 36/66 (54%), Positives = 49/66 (74%)
 Frame = -2

Query: 201  SCSFALSMTEPESFEEAQQSYVWKQAMQDEITAIQKNNTWKLTELPQGKKKIGLKWVFRT 22
            SC FAL +++P  +EEA +   WK AM +EI AI++N+TW+L + P+GK  IGLKWVFRT
Sbjct: 809  SCQFALLVSDPICYEEAVEQSEWKNAMIEEIQAIERNSTWELVDAPEGKNVIGLKWVFRT 868

Query: 21   KYKPNG 4
            KY  +G
Sbjct: 869  KYNADG 874


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/76 (51%), Positives = 53/76 (69%)
 Frame = -2

Query: 231  RVRELREIYESCSFALSMTEPESFEEAQQSYVWKQAMQDEITAIQKNNTWKLTELPQGKK 52
            + R LR+IYE+    L + +P +FEEA +   W  AM++EI AI+KN TW+L ELP+ K 
Sbjct: 789  KFRSLRDIYETTQ-VLFVADPTTFEEAVEKEEWCSAMKEEIVAIEKNETWELVELPEDKN 847

Query: 51   KIGLKWVFRTKYKPNG 4
             IG+KWVFRTKY  +G
Sbjct: 848  VIGVKWVFRTKYLADG 863


>emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera]
          Length = 894

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 37/75 (49%), Positives = 52/75 (69%)
 Frame = -2

Query: 228 VRELREIYESCSFALSMTEPESFEEAQQSYVWKQAMQDEITAIQKNNTWKLTELPQGKKK 49
           +R L +IY+ CS A+  TEP S+ EA+ S  W++AMQ+E+  I KN TW+L E P+  K 
Sbjct: 353 IRSLEDIYQRCSLAI--TEPTSYVEAKDSEAWRRAMQEELKMINKNETWQLVERPKNHKV 410

Query: 48  IGLKWVFRTKYKPNG 4
           IG+KWVF+TK   +G
Sbjct: 411 IGVKWVFKTKLNSDG 425


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/76 (51%), Positives = 53/76 (69%)
 Frame = -2

Query: 231  RVRELREIYESCSFALSMTEPESFEEAQQSYVWKQAMQDEITAIQKNNTWKLTELPQGKK 52
            + R LR+IYE+    L + +P +FEEA +   W  AM++EI AI+KN TW+L ELP+ K 
Sbjct: 900  KFRSLRDIYETTQ-VLFVADPTTFEEAVEKEEWCSAMKEEIAAIEKNETWELVELPEDKN 958

Query: 51   KIGLKWVFRTKYKPNG 4
             IG+KWVFRTKY  +G
Sbjct: 959  VIGVKWVFRTKYLADG 974


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