BLASTX nr result

ID: Dioscorea21_contig00039053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00039053
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332086.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
dbj|BAK03837.1| predicted protein [Hordeum vulgare subsp. vulgare]     66   3e-09
ref|XP_004138880.1| PREDICTED: uncharacterized protein LOC101213...    61   1e-07
ref|XP_003580724.1| PREDICTED: uncharacterized protein LOC100844...    61   1e-07
gb|ABK28263.1| unknown [Arabidopsis thaliana]                          60   2e-07

>ref|XP_002332086.1| predicted protein [Populus trichocarpa] gi|222874906|gb|EEF12037.1|
           predicted protein [Populus trichocarpa]
          Length = 384

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 49/141 (34%), Positives = 71/141 (50%)
 Frame = -3

Query: 423 KDRPSPVPPSEIVARRDGDLSSIVLKRPAQYHQSGSAERLQKRQRMDKPSLHDQFSLHSK 244
           +DRPSP+ P+               KRP Q+ Q+ + +   +R+   +  +     + SK
Sbjct: 143 RDRPSPLGPNG--------------KRPVQHLQTVAEQSENEREGSAQRPIEGS-RIQSK 187

Query: 243 SLXXXXXXXXXXXVGRKEDFECISGRPLLAPLGIPFCAASVGGPRRSLPLNISGSTVGSV 64
                           + +F   S  PLLAPLGIPFC+ASVGG R+++P+  SG     V
Sbjct: 188 DQTAFVEDGEEVEHANRLNF---SRTPLLAPLGIPFCSASVGGARKTMPVASSGD---FV 241

Query: 63  TSYNCGELCNSEDLRTRMEKI 1
             Y+ GEL +SE LR RME+I
Sbjct: 242 RYYDSGELSDSEMLRKRMEQI 262


>dbj|BAK03837.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 427

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 44/124 (35%), Positives = 64/124 (51%)
 Frame = -3

Query: 375 DGDLSSIVLKRPAQYHQSGSAERLQKRQRMDKPSLHDQFSLHSKSLXXXXXXXXXXXVGR 196
           +G LSS+ LKR   + Q  +AE + K  R+D+  L  + +L  + +              
Sbjct: 190 NGALSSLELKRSVSFQQCEAAEPMAKHLRVDQ--LLPENALRQRRIMSDAAGHSAQ---- 243

Query: 195 KEDFECISGRPLLAPLGIPFCAASVGGPRRSLPLNISGSTVGSVTSYNCGELCNSEDLRT 16
                 +S  P+ APLGIPFC+ASVGG R+ LP  ++       + Y  G+L N+E LR 
Sbjct: 244 ------MSKSPVRAPLGIPFCSASVGGSRKLLPPAVNAGEDHFSSCYEQGQLLNTEVLRK 297

Query: 15  RMEK 4
           RMEK
Sbjct: 298 RMEK 301


>ref|XP_004138880.1| PREDICTED: uncharacterized protein LOC101213741 [Cucumis sativus]
           gi|449499602|ref|XP_004160861.1| PREDICTED:
           uncharacterized protein LOC101229002 [Cucumis sativus]
          Length = 407

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 50/149 (33%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
 Frame = -3

Query: 423 KDRPSPVPP-------SEIVARRD-GDLSSIVLKRPAQYHQSGSAERLQKRQRMDKPSLH 268
           KDRPS + P       S + A  D GD +    KRP Q  Q G AE  +    +  P   
Sbjct: 142 KDRPSILGPNGKVECISHLSANMDNGDATLCDYKRPVQNLQ-GIAELPENNIEVRVPQPS 200

Query: 267 DQFSLHSKSLXXXXXXXXXXXVGRKEDFECISGRPLLAPLGIPFCAASVGGPRRSLPLNI 88
            +  L +K              G+      +  R LLAPLGIPFC+AS+GG R++ P++ 
Sbjct: 201 GKQDLQNKIQVEATKVEDREEAGQSNHSSLLRSR-LLAPLGIPFCSASIGGARKTRPVDC 259

Query: 87  SGSTVGSVTSYNCGELCNSEDLRTRMEKI 1
                G  +  + G L ++E LR RME+I
Sbjct: 260 G----GDFSLSDVGHLLDTESLRRRMEQI 284


>ref|XP_003580724.1| PREDICTED: uncharacterized protein LOC100844231 [Brachypodium
           distachyon]
          Length = 426

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 47/127 (37%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
 Frame = -3

Query: 381 RRDGDLSSIVLKRPAQYHQSGSAERLQKRQRMDKPSLHDQFSLHSKSLXXXXXXXXXXXV 202
           + +G LSS+ LKR     Q  SAE L KR             LH + L           +
Sbjct: 187 QENGTLSSLELKRSMCLQQCESAEPLGKR-------------LHVEQLLPENMLKQRRVM 233

Query: 201 GRKEDFEC-ISGRPLLAPLGIPFCAASVGGPRRSLPLNISGSTVGSVTSYNCGELCNSED 25
               D    +S  P+ APLGIPFC+AS GG R+ LP  IS       +    G+L N+E 
Sbjct: 234 SDAADHSARMSKSPVRAPLGIPFCSASAGGARKLLPPPISAGEDRFSSFCEHGQLLNTEV 293

Query: 24  LRTRMEK 4
           LR RMEK
Sbjct: 294 LRKRMEK 300


>gb|ABK28263.1| unknown [Arabidopsis thaliana]
          Length = 380

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/59 (49%), Positives = 44/59 (74%)
 Frame = -3

Query: 177 ISGRPLLAPLGIPFCAASVGGPRRSLPLNISGSTVGSVTSYNCGELCNSEDLRTRMEKI 1
           +S  P++APLGIPFC+ASVGG RR++P++ S +   +++ Y+ G L ++E LR RME I
Sbjct: 199 LSTPPVMAPLGIPFCSASVGGDRRTVPVSTSAA---AISCYDSGGLSDTEMLRKRMENI 254


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