BLASTX nr result

ID: Dioscorea21_contig00038947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038947
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK05391.1| predicted protein [Hordeum vulgare subsp. vulgare]    127   7e-28
dbj|BAK03475.1| predicted protein [Hordeum vulgare subsp. vulgare]    127   7e-28
gb|AFK34626.1| unknown [Medicago truncatula]                          124   6e-27
ref|XP_003637215.1| F-box/kelch-repeat protein [Medicago truncat...   124   6e-27
ref|XP_002456082.1| hypothetical protein SORBIDRAFT_03g030090 [S...   124   6e-27

>dbj|BAK05391.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 420

 Score =  127 bits (320), Expect = 7e-28
 Identities = 57/87 (65%), Positives = 73/87 (83%)
 Frame = +3

Query: 6   VREVFMGWRGGDESVVCNGVLYCLIYATGIVGTADFRHGLIMYDLSVRSHGSSLKRNSIP 185
           V+EVF+GWRGGD+SV+C GVLYCLI +TG++G  + RH LIMYDL      +SL ++SIP
Sbjct: 236 VKEVFIGWRGGDDSVICGGVLYCLIQSTGVLGNVEPRHRLIMYDLVAGPSETSLTQSSIP 295

Query: 186 VPCSLTCGRLMNLKDRLVMVGGIGKPD 266
           VPCSLTCGRL+NL+++LVMVGGI KP+
Sbjct: 296 VPCSLTCGRLLNLREKLVMVGGIAKPN 322


>dbj|BAK03475.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 399

 Score =  127 bits (320), Expect = 7e-28
 Identities = 57/87 (65%), Positives = 73/87 (83%)
 Frame = +3

Query: 6   VREVFMGWRGGDESVVCNGVLYCLIYATGIVGTADFRHGLIMYDLSVRSHGSSLKRNSIP 185
           V+EVF+GWRGGD+SV+C GVLYCLI +TG++G  + RH LIMYDL      +SL ++SIP
Sbjct: 236 VKEVFIGWRGGDDSVICGGVLYCLIQSTGVLGNVEPRHRLIMYDLVAGPSETSLTQSSIP 295

Query: 186 VPCSLTCGRLMNLKDRLVMVGGIGKPD 266
           VPCSLTCGRL+NL+++LVMVGGI KP+
Sbjct: 296 VPCSLTCGRLLNLREKLVMVGGIAKPN 322


>gb|AFK34626.1| unknown [Medicago truncatula]
          Length = 404

 Score =  124 bits (312), Expect = 6e-27
 Identities = 57/88 (64%), Positives = 74/88 (84%)
 Frame = +3

Query: 3   PVREVFMGWRGGDESVVCNGVLYCLIYATGIVGTADFRHGLIMYDLSVRSHGSSLKRNSI 182
           P+ EV +GWRGGDESV+CNGVLY L+Y+TG+V   + RH ++ Y++S RS  +SL+R+ I
Sbjct: 220 PLTEVLVGWRGGDESVICNGVLYFLVYSTGVVPPEN-RHAVVAYNISGRSSQTSLRRSFI 278

Query: 183 PVPCSLTCGRLMNLKDRLVMVGGIGKPD 266
           PVPCSLTCGRLMN+K++LVMVGGIGK D
Sbjct: 279 PVPCSLTCGRLMNMKEKLVMVGGIGKSD 306


>ref|XP_003637215.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355503150|gb|AES84353.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 404

 Score =  124 bits (312), Expect = 6e-27
 Identities = 57/88 (64%), Positives = 74/88 (84%)
 Frame = +3

Query: 3   PVREVFMGWRGGDESVVCNGVLYCLIYATGIVGTADFRHGLIMYDLSVRSHGSSLKRNSI 182
           P+ EV +GWRGGDESV+CNGVLY L+Y+TG+V   + RH ++ Y++S RS  +SL+R+ I
Sbjct: 220 PLTEVLVGWRGGDESVICNGVLYFLVYSTGVVPPEN-RHAVVAYNISGRSSQTSLRRSFI 278

Query: 183 PVPCSLTCGRLMNLKDRLVMVGGIGKPD 266
           PVPCSLTCGRLMN+K++LVMVGGIGK D
Sbjct: 279 PVPCSLTCGRLMNMKEKLVMVGGIGKSD 306


>ref|XP_002456082.1| hypothetical protein SORBIDRAFT_03g030090 [Sorghum bicolor]
           gi|241928057|gb|EES01202.1| hypothetical protein
           SORBIDRAFT_03g030090 [Sorghum bicolor]
          Length = 406

 Score =  124 bits (312), Expect = 6e-27
 Identities = 56/85 (65%), Positives = 72/85 (84%)
 Frame = +3

Query: 6   VREVFMGWRGGDESVVCNGVLYCLIYATGIVGTADFRHGLIMYDLSVRSHGSSLKRNSIP 185
           V EVF+GWRGGD+SV+C+GVLYCLI++TG++G  + RHGLIMYDL+     +SL + SI 
Sbjct: 222 VSEVFIGWRGGDDSVICDGVLYCLIHSTGVLGNVNPRHGLIMYDLAGEPSETSLMQTSIS 281

Query: 186 VPCSLTCGRLMNLKDRLVMVGGIGK 260
           VPCSLTCGRL+NLK++LV+VGGI K
Sbjct: 282 VPCSLTCGRLVNLKEKLVLVGGIAK 306


Top