BLASTX nr result

ID: Dioscorea21_contig00038934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038934
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315858.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
ref|XP_003631331.1| PREDICTED: LOW QUALITY PROTEIN: protein BRAS...    73   2e-11
ref|XP_002517774.1| serine-threonine protein kinase, plant-type,...    72   4e-11
emb|CBI18489.3| unnamed protein product [Vitis vinifera]               71   8e-11
ref|XP_002531725.1| leucine-rich repeat receptor protein kinase ...    71   8e-11

>ref|XP_002315858.1| predicted protein [Populus trichocarpa] gi|222864898|gb|EEF02029.1|
           predicted protein [Populus trichocarpa]
          Length = 995

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/98 (40%), Positives = 53/98 (54%)
 Frame = +1

Query: 1   RNLCNLHTLGLFTNKXXXXXXXXXXXXSGCVSESIQVLNLRGNKFRGDLSDWIGTLRRIT 180
           RNLCNL  L L  NK            + C+  S+Q L L  N  RG L D +G+ + + 
Sbjct: 299 RNLCNLRELDLSNNKFSGEISQPFGSPTSCLQNSLQSLVLETNNLRGSLPDSLGSYKHLV 358

Query: 181 LLDLSKNLFYGSIPAALGKLPTLTYLYLDHNEFNGSLP 294
            L+L  N F G IPA++G+L +L  L L HN  NGS+P
Sbjct: 359 NLNLYSNAFSGPIPASIGRLSSLKLLDLSHNYLNGSVP 396


>ref|XP_003631331.1| PREDICTED: LOW QUALITY PROTEIN: protein BRASSINOSTEROID INSENSITIVE
           1-like [Vitis vinifera]
          Length = 822

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/95 (43%), Positives = 53/95 (55%)
 Frame = +1

Query: 1   RNLCNLHTLGLFTNKXXXXXXXXXXXXSGCVSESIQVLNLRGNKFRGDLSDWIGTLRRIT 180
           R+LCNL TL L  N             S C + S++ L L GN+F G +  WIG L R+ 
Sbjct: 176 RSLCNLVTLDLSFNNIGSEGIELVNGLSICSNNSLEGLYLGGNEFSGPIPTWIGNLLRMK 235

Query: 181 LLDLSKNLFYGSIPAALGKLPTLTYLYLDHNEFNG 285
            L LS NL  G+IP ++G+L  LT LYLD N + G
Sbjct: 236 RLGLSFNLMNGTIPESIGQLRELTVLYLDWNSWEG 270


>ref|XP_002517774.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223543046|gb|EEF44581.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 869

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
 Frame = +1

Query: 7   LCNLHTLGLFTNKXXXXXXXXXXXXSGCVSES----IQVLNLRGNKFRGDLSDWIGTLRR 174
           LC+L  L  F +               C S+S    +Q L L  N+  G L +W+G L+ 
Sbjct: 272 LCSLEYLDFFQSNLTGSLPEVLVGADNCFSKSPFPLLQFLMLGDNQLVGKLPNWLGELQN 331

Query: 175 ITLLDLSKNLFYGSIPAALGKLPTLTYLYLDHNEFNGSLP 294
           + +L L  NLF+GSIPA+ G L  LT +YL+ N+ NG+LP
Sbjct: 332 LVILSLHSNLFHGSIPASFGSLKQLTEIYLNQNQLNGTLP 371


>emb|CBI18489.3| unnamed protein product [Vitis vinifera]
          Length = 1344

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 42/101 (41%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
 Frame = +1

Query: 4    NLCNLHTLGLFTNKXXXXXXXXXXXXSGCVSES----IQVLNLRGNKFRGDLSDWIGTLR 171
            N CNL  L L  N               C S+S    +  L+L  N+  G L +W+G L+
Sbjct: 915  NFCNLKYLDLSFNLLNGSLPEIIKGLETCSSKSPLPNLTKLSLYNNQLMGKLPNWLGELK 974

Query: 172  RITLLDLSKNLFYGSIPAALGKLPTLTYLYLDHNEFNGSLP 294
             +  LDLS N F G IPA+LG L  L +LYL  NE NGSLP
Sbjct: 975  NLKALDLSNNKFEGPIPASLGTLQHLEFLYLLENELNGSLP 1015


>ref|XP_002531725.1| leucine-rich repeat receptor protein kinase exs precursor, putative
           [Ricinus communis] gi|223528628|gb|EEF30645.1|
           leucine-rich repeat receptor protein kinase exs
           precursor, putative [Ricinus communis]
          Length = 1082

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 41/98 (41%), Positives = 54/98 (55%)
 Frame = +1

Query: 1   RNLCNLHTLGLFTNKXXXXXXXXXXXXSGCVSESIQVLNLRGNKFRGDLSDWIGTLRRIT 180
           RNLCNL +L L  NK            SGCVS+ ++ L L  ++  G LSD +   + + 
Sbjct: 420 RNLCNLRSLELSINKLSQEINEVFEILSGCVSDILESLILPSSQLSGHLSDRLVKFKNLA 479

Query: 181 LLDLSKNLFYGSIPAALGKLPTLTYLYLDHNEFNGSLP 294
            LDL+ NL  G IP  LG+L  L  L L +N+ NGSLP
Sbjct: 480 YLDLNDNLISGPIPENLGELNFLISLDLGNNKLNGSLP 517


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