BLASTX nr result

ID: Dioscorea21_contig00038918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038918
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522564.1| ubiquitin-protein ligase, putative [Ricinus ...    70   1e-10
ref|XP_002266726.1| PREDICTED: U-box domain-containing protein 7...    69   4e-10
ref|XP_002316829.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002305078.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|NP_180312.2| armadillo/beta-catenin-like repeat-containing p...    57   2e-06

>ref|XP_002522564.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223538255|gb|EEF39864.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 439

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/73 (45%), Positives = 48/73 (65%)
 Frame = +1

Query: 19  RKIAIEALLELANGTFTNKALMVESGLIAKLPNIFNTLDSSTQEQXXXXXXXXXXXXXTQ 198
           R++A++AL+ELANGT+TNK LMVE+G+++KLP   N  + ST+ +             TQ
Sbjct: 137 RRVAVKALIELANGTYTNKTLMVEAGILSKLPKDINVSEESTRHEFAELILSLSSLGNTQ 196

Query: 199 HSIQPHEILPFLI 237
            SI   E+LPFL+
Sbjct: 197 FSITSSEVLPFLV 209


>ref|XP_002266726.1| PREDICTED: U-box domain-containing protein 7 [Vitis vinifera]
           gi|297740492|emb|CBI30674.3| unnamed protein product
           [Vitis vinifera]
          Length = 431

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/73 (45%), Positives = 47/73 (64%)
 Frame = +1

Query: 19  RKIAIEALLELANGTFTNKALMVESGLIAKLPNIFNTLDSSTQEQXXXXXXXXXXXXXTQ 198
           R++A++ L+ELANGT+TNKALMVE+GL++ LP   +T+D ST  +             TQ
Sbjct: 134 RRLAVQTLIELANGTYTNKALMVEAGLLSNLPQNTDTIDESTMHEFARLLLSISFLTNTQ 193

Query: 199 HSIQPHEILPFLI 237
             +   EILPFL+
Sbjct: 194 FPLNSTEILPFLV 206


>ref|XP_002316829.1| predicted protein [Populus trichocarpa] gi|222859894|gb|EEE97441.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
 Frame = +1

Query: 19  RKIAIEALLELANGTFTNKALMVESGLIAKLPNIFNTLDSSTQ-EQXXXXXXXXXXXXXT 195
           R++AI+AL+ELANGT+TNKALMVE+G+ +KLP   + L+  T+ E              T
Sbjct: 126 RRVAIKALIELANGTYTNKALMVEAGIFSKLPVNIDVLEEPTRHEFAELILSLSSLANHT 185

Query: 196 QHSIQPHEILPFLI 237
           Q  +   E+LPFLI
Sbjct: 186 QFPLASSEVLPFLI 199


>ref|XP_002305078.1| predicted protein [Populus trichocarpa] gi|222848042|gb|EEE85589.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
 Frame = +1

Query: 7   VSPGRKIAIEALLELANGTFTNKALMVESGLIAKLPNIFNTLDSST-QEQXXXXXXXXXX 183
           V+  +++A+ AL+ELANGT+ NKALMVE+G+ +KLP   + L+  T QE           
Sbjct: 134 VAGRQRVAVNALIELANGTYKNKALMVEAGIFSKLPKSMDVLEEPTRQEFAELILSLSSL 193

Query: 184 XXXTQHSIQPHEILPFLI 237
              TQ  +   E+LPFLI
Sbjct: 194 ANHTQFPLASSEVLPFLI 211


>ref|NP_180312.2| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis
           thaliana] gi|27413513|gb|AAO11674.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|61742614|gb|AAX55128.1| hypothetical protein
           At2g27430 [Arabidopsis thaliana]
           gi|330252902|gb|AEC07996.1| armadillo/beta-catenin-like
           repeat-containing protein [Arabidopsis thaliana]
          Length = 438

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/77 (38%), Positives = 44/77 (57%)
 Frame = +1

Query: 7   VSPGRKIAIEALLELANGTFTNKALMVESGLIAKLPNIFNTLDSSTQEQXXXXXXXXXXX 186
           VS  +K A+ AL++L++GT+TNKALMV + + +KLP     LD ST+             
Sbjct: 132 VSGHQKAAVNALIQLSHGTYTNKALMVNADICSKLPKNVEVLDQSTRHAFAELLLSLSSL 191

Query: 187 XXTQHSIQPHEILPFLI 237
             TQ  +   +ILPFL+
Sbjct: 192 TNTQLPVASSQILPFLM 208


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