BLASTX nr result

ID: Dioscorea21_contig00038906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038906
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24922.3| unnamed protein product [Vitis vinifera]              199   2e-49
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...   199   2e-49
ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom...   198   4e-49
ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis...   198   4e-49
ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|2...   197   6e-49

>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score =  199 bits (506), Expect = 2e-49
 Identities = 98/108 (90%), Positives = 101/108 (93%)
 Frame = +3

Query: 3   KKIEARKNWLRQFEPGTYLDQSAKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR 182
           KKIE RKNWLRQF+PGTYLDQ  KLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR
Sbjct: 651 KKIEERKNWLRQFQPGTYLDQKEKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR 710

Query: 183 KILYCSFKRPLIKELKVAQFSGYVSEKSAYHHGEQSLASTIIGMAQDF 326
           KIL+CSFKR  IKE K+AQFSGYVSE SAYHHGEQSLASTIIGMAQDF
Sbjct: 711 KILFCSFKRNFIKEAKIAQFSGYVSEHSAYHHGEQSLASTIIGMAQDF 758


>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score =  199 bits (506), Expect = 2e-49
 Identities = 98/108 (90%), Positives = 101/108 (93%)
 Frame = +3

Query: 3   KKIEARKNWLRQFEPGTYLDQSAKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR 182
           KKIE RKNWLRQF+PGTYLDQ  KLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR
Sbjct: 651 KKIEERKNWLRQFQPGTYLDQKEKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR 710

Query: 183 KILYCSFKRPLIKELKVAQFSGYVSEKSAYHHGEQSLASTIIGMAQDF 326
           KIL+CSFKR  IKE K+AQFSGYVSE SAYHHGEQSLASTIIGMAQDF
Sbjct: 711 KILFCSFKRNFIKEAKIAQFSGYVSEHSAYHHGEQSLASTIIGMAQDF 758


>ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-like [Cucumis
           sativus]
          Length = 1460

 Score =  198 bits (503), Expect = 4e-49
 Identities = 98/108 (90%), Positives = 102/108 (94%)
 Frame = +3

Query: 3   KKIEARKNWLRQFEPGTYLDQSAKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR 182
           KKIE RKNWLRQFEPGT+LDQ+ KLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR
Sbjct: 615 KKIEDRKNWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR 674

Query: 183 KILYCSFKRPLIKELKVAQFSGYVSEKSAYHHGEQSLASTIIGMAQDF 326
           KIL+CSFKR  IKE KV+QFSGYVSE SAYHHGEQSLASTIIGMAQDF
Sbjct: 675 KILFCSFKRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDF 722


>ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis sativus]
          Length = 1459

 Score =  198 bits (503), Expect = 4e-49
 Identities = 98/108 (90%), Positives = 102/108 (94%)
 Frame = +3

Query: 3   KKIEARKNWLRQFEPGTYLDQSAKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR 182
           KKIE RKNWLRQFEPGT+LDQ+ KLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR
Sbjct: 615 KKIEDRKNWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR 674

Query: 183 KILYCSFKRPLIKELKVAQFSGYVSEKSAYHHGEQSLASTIIGMAQDF 326
           KIL+CSFKR  IKE KV+QFSGYVSE SAYHHGEQSLASTIIGMAQDF
Sbjct: 675 KILFCSFKRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDF 722


>ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|222845679|gb|EEE83226.1|
           predicted protein [Populus trichocarpa]
          Length = 1468

 Score =  197 bits (502), Expect = 6e-49
 Identities = 95/108 (87%), Positives = 103/108 (95%)
 Frame = +3

Query: 3   KKIEARKNWLRQFEPGTYLDQSAKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR 182
           KKIEARKNWLRQ+EPGT+LDQ+ KLIKYSDF+NKELILFSMADLQRSIPSMVDGLKPGQR
Sbjct: 648 KKIEARKNWLRQYEPGTHLDQNQKLIKYSDFINKELILFSMADLQRSIPSMVDGLKPGQR 707

Query: 183 KILYCSFKRPLIKELKVAQFSGYVSEKSAYHHGEQSLASTIIGMAQDF 326
           KIL+CSFKR  +KE K++QFSGYVSE SAYHHGEQSLASTIIGMAQDF
Sbjct: 708 KILFCSFKRNFVKEAKISQFSGYVSEHSAYHHGEQSLASTIIGMAQDF 755


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