BLASTX nr result

ID: Dioscorea21_contig00038886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038886
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531283.1| ring finger protein, putative [Ricinus commu...    92   4e-17
ref|XP_002319079.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
ref|XP_002311661.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_003536126.1| PREDICTED: E3 ubiquitin protein ligase DRIP2...    79   5e-13
ref|XP_002315733.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13

>ref|XP_002531283.1| ring finger protein, putative [Ricinus communis]
           gi|223529116|gb|EEF31096.1| ring finger protein,
           putative [Ricinus communis]
          Length = 445

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 46/65 (70%), Positives = 52/65 (80%)
 Frame = -1

Query: 394 KLGLQSEAEVEITCRGQSVAPTMALHNLVDLWLRAGSSSRVQATLGNPAKEFVMVLSYGR 215
           KL L SEAEVEI CRGQSV PT+ LHNLVDLW R  SS +V A++G+ AK+FVMVLSY R
Sbjct: 381 KLDLTSEAEVEIMCRGQSVLPTLQLHNLVDLWFRTASSKKVPASVGSSAKDFVMVLSYNR 440

Query: 214 KVIAS 200
           KV AS
Sbjct: 441 KVQAS 445


>ref|XP_002319079.1| predicted protein [Populus trichocarpa] gi|222857455|gb|EEE95002.1|
           predicted protein [Populus trichocarpa]
          Length = 430

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/63 (66%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
 Frame = -1

Query: 394 KLGLQSEAEVEITCRGQSVAPTMALHNLVDLWLRAGSSS-RVQATLGNPAKEFVMVLSYG 218
           KL L SE EVEI CRGQ V PT+ L NLVDLW R GS+S +V A++G+ AK+FVMVLSY 
Sbjct: 365 KLDLDSETEVEILCRGQPVGPTLPLQNLVDLWFRTGSTSKKVPASVGSSAKDFVMVLSYC 424

Query: 217 RKV 209
           RKV
Sbjct: 425 RKV 427


>ref|XP_002311661.1| predicted protein [Populus trichocarpa] gi|222851481|gb|EEE89028.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 5/77 (6%)
 Frame = -1

Query: 394 KLGLQSEAEVEITCRGQSVAPTMALHNLVDLWLR-AGSSSRVQATLGNPAKEFVMVLSYG 218
           KLGL SEAEV+I   GQ VA T+ LHNLVD W + A +S R+Q T+G+ AK+FVMVLSYG
Sbjct: 336 KLGLVSEAEVDILLLGQPVASTLQLHNLVDWWSQTASASERIQTTVGSSAKDFVMVLSYG 395

Query: 217 RKVI----AS*AGEFHV 179
           RKV      + A EFH+
Sbjct: 396 RKVSLQKHLATAAEFHL 412


>ref|XP_003536126.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
          Length = 450

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/64 (60%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
 Frame = -1

Query: 394 KLGLQSEAEVEITCRGQSVAPTMALHNLVDLWLR-AGSSSRVQATLGNPAKEFVMVLSYG 218
           KL L  EAEVEI CRGQ V P++ LHNLVDLW R A +S ++ A++G+ AK+FVMVLSY 
Sbjct: 385 KLNLACEAEVEIMCRGQPVLPSLQLHNLVDLWFRTASTSKKIPASVGSSAKDFVMVLSYC 444

Query: 217 RKVI 206
           RK +
Sbjct: 445 RKAL 448


>ref|XP_002315733.1| predicted protein [Populus trichocarpa] gi|222864773|gb|EEF01904.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/62 (64%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
 Frame = -1

Query: 394 KLGLQSEAEVEITCRGQSVAPTMALHNLVDLWLR-AGSSSRVQATLGNPAKEFVMVLSYG 218
           KLGL  EAEVEI+ RGQ V  T+ LHNLVD WL+ A +S R++ T+G+ AK+FVMVLSYG
Sbjct: 354 KLGLVREAEVEISMRGQPVVSTLQLHNLVDWWLQTASASERIRTTVGSSAKDFVMVLSYG 413

Query: 217 RK 212
           RK
Sbjct: 414 RK 415


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