BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038885
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520932.1| pentatricopeptide repeat-containing protein,...    81   1e-13
ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
gb|ABL85051.1| hypothetical protein 57h21.26 [Brachypodium sylva...    76   3e-12
ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containi...    76   3e-12

>ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539898|gb|EEF41477.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 757

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/76 (51%), Positives = 55/76 (72%)
 Frame = +3

Query: 24  IVPPVFKACAHLQSMNQGISLHADVLKLGFKSYTSTCNSIMNFYNKCGMMGSASTLFDEM 203
           + PPV KAC++L  ++ G  LHA ++K  F S+TS  NSI+NFY KCG + +A ++FD M
Sbjct: 67  LFPPVLKACSYLSYID-GKCLHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDSM 125

Query: 204 VNKDSVSWNSVIHGFL 251
            ++DSVSWN +IHG L
Sbjct: 126 RSRDSVSWNVLIHGCL 141



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/82 (34%), Positives = 46/82 (56%)
 Frame = +3

Query: 6   LLPGNEIVPPVFKACAHLQSMNQGISLHADVLKLGFKSYTSTCNSIMNFYNKCGMMGSAS 185
           + P   I+  V KACA+  ++  G  +H   +  G  S     NS+++ Y+KC   GSA 
Sbjct: 262 ITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDSDLFVKNSLIDMYSKCKDAGSAF 321

Query: 186 TLFDEMVNKDSVSWNSVIHGFL 251
            +F EM  +++VSWNS++ G +
Sbjct: 322 EVFSEMPRRNNVSWNSLLSGLI 343


>ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Glycine max]
          Length = 566

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/71 (46%), Positives = 50/71 (70%)
 Frame = +3

Query: 36  VFKACAHLQSMNQGISLHADVLKLGFKSYTSTCNSIMNFYNKCGMMGSASTLFDEMVNKD 215
           +FKACA +  ++ G ++HA VLKLGF+S+    N+++N Y  CG +G A  +FDEM  +D
Sbjct: 83  LFKACARVPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMPERD 142

Query: 216 SVSWNSVIHGF 248
            VSWNS++ G+
Sbjct: 143 LVSWNSLVCGY 153



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/78 (38%), Positives = 43/78 (55%)
 Frame = +3

Query: 12  PGNEIVPPVFKACAHLQSMNQGISLHADVLKLGFKSYTSTCNSIMNFYNKCGMMGSASTL 191
           P    V  V  ACAH  S++ G + H  + K   K+     N++++ Y KCG++  A  +
Sbjct: 308 PDEITVASVLSACAHTGSLDVGEAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEV 367

Query: 192 FDEMVNKDSVSWNSVIHG 245
           F EM  KDSVSW S+I G
Sbjct: 368 FKEMRKKDSVSWTSIISG 385


>ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Vitis vinifera]
          Length = 742

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/77 (50%), Positives = 53/77 (68%)
 Frame = +3

Query: 24  IVPPVFKACAHLQSMNQGISLHADVLKLGFKSYTSTCNSIMNFYNKCGMMGSASTLFDEM 203
           +V  + KAC+ L  +  G S+HA +LK GF S TST NS+++FY K G + SA  +FD M
Sbjct: 52  LVHSILKACSSLP-VRHGKSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSM 110

Query: 204 VNKDSVSWNSVIHGFLS 254
            ++DSVSWN +IHG LS
Sbjct: 111 RSRDSVSWNIMIHGHLS 127



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/74 (39%), Positives = 43/74 (58%)
 Frame = +3

Query: 36  VFKACAHLQSMNQGISLHADVLKLGFKSYTSTCNSIMNFYNKCGMMGSASTLFDEMVNKD 215
           V KACA+   ++ G S+H  V+  G        NSI++ Y+KC    SA   F+EM  ++
Sbjct: 257 VLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRN 316

Query: 216 SVSWNSVIHGFLST 257
           +VSWNS+I G + T
Sbjct: 317 TVSWNSIISGLVRT 330


>gb|ABL85051.1| hypothetical protein 57h21.26 [Brachypodium sylvaticum]
          Length = 753

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 31/75 (41%), Positives = 50/75 (66%)
 Frame = +3

Query: 24  IVPPVFKACAHLQSMNQGISLHADVLKLGFKSYTSTCNSIMNFYNKCGMMGSASTLFDEM 203
           +V  +   C+H   +  G+ LHA  +KLGF+ Y    NS+++ Y+KCG M +A  +FD+M
Sbjct: 512 VVSSLISCCSHHSMIVHGLQLHATTIKLGFELYLIIQNSLISLYSKCGEMVAAQNIFDQM 571

Query: 204 VNKDSVSWNSVIHGF 248
           V +D V+WN++IHG+
Sbjct: 572 VKRDVVTWNTLIHGY 586


>ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Vitis vinifera]
          Length = 634

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/82 (41%), Positives = 52/82 (63%)
 Frame = +3

Query: 6   LLPGNEIVPPVFKACAHLQSMNQGISLHADVLKLGFKSYTSTCNSIMNFYNKCGMMGSAS 185
           +LP   + P VF+AC  L  +  GI +H DV+  G +     CNS+++ Y+K G +GS  
Sbjct: 120 VLPDKYVFPKVFRACGQLLWLEVGIQVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGR 179

Query: 186 TLFDEMVNKDSVSWNSVIHGFL 251
            +FDEMV +D +SWNS+I G++
Sbjct: 180 RVFDEMVERDVLSWNSMISGYV 201



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/74 (35%), Positives = 44/74 (59%)
 Frame = +3

Query: 27  VPPVFKACAHLQSMNQGISLHADVLKLGFKSYTSTCNSIMNFYNKCGMMGSASTLFDEMV 206
           +  V  AC     +  G  +HA + K  F S     N++++ Y+KCG +G+A ++F  M+
Sbjct: 398 ISTVLPAC----DLKSGKQVHAYITKNSFSSVIPVWNALIHMYSKCGCIGTAYSIFSNMI 453

Query: 207 NKDSVSWNSVIHGF 248
           ++D VSWN++I GF
Sbjct: 454 SRDLVSWNTMIGGF 467