BLASTX nr result

ID: Dioscorea21_contig00038866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038866
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA63801.1| TPA: hypothetical protein ZEAMMB73_367984 [Zea m...   101   7e-20
gb|ABR17838.1| unknown [Picea sitchensis]                             100   2e-19
ref|XP_002273989.2| PREDICTED: pentatricopeptide repeat-containi...    96   3e-18
emb|CBI32643.3| unnamed protein product [Vitis vinifera]               96   3e-18
ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group] g...    96   4e-18

>tpg|DAA63801.1| TPA: hypothetical protein ZEAMMB73_367984 [Zea mays]
          Length = 711

 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/132 (40%), Positives = 79/132 (59%)
 Frame = -2

Query: 397 VLSFQEMQLVHGMKPDEFGIMNVLEVVCCLDKCAGGRKGKSIHCFAMKNGLDSEIKVQSS 218
           V++  +     G +PD    M    V+    K    R G ++H +A+K G+  +I V ++
Sbjct: 250 VMTLLKRMKSEGFRPDS---MIFATVIPACGKVKELRTGMALHGYAVKCGVGDDICVPNA 306

Query: 217 VLDMYCKCGNSDMGRYLFRLLDCKDIVSWSSIIAGHSQNFEYVESLALFLEMLSLHVRPN 38
           ++DMYCKC   DM   LF  +D KD+ SWS+IIAGHSQN  Y  S++LF EM++  ++PN
Sbjct: 307 LVDMYCKCARLDMAASLFWSIDHKDVFSWSTIIAGHSQNRIYNVSVSLFTEMVASGIKPN 366

Query: 37  PVTIASVLPGFS 2
             TIAS+LP  S
Sbjct: 367 STTIASILPSIS 378



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 42/130 (32%), Positives = 70/130 (53%)
 Frame = -2

Query: 400 AVLSFQEMQLVHGMKPDEFGIMNVLEVVCCLDKCAGGRKGKSIHCFAMKNGLDSEIKVQS 221
           +V  F EM +  G+KP+   I ++L  +  L      R GK IHCF+++N L+    + S
Sbjct: 351 SVSLFTEM-VASGIKPNSTTIASILPSISELRLL---RYGKEIHCFSLRNRLEHSEFLAS 406

Query: 220 SVLDMYCKCGNSDMGRYLFRLLDCKDIVSWSSIIAGHSQNFEYVESLALFLEMLSLHVRP 41
           +++D YC+ G     + +F      D+V  +S+I G+  N +   +L L   +L   +RP
Sbjct: 407 ALIDFYCRQGYIRDAQIVFEFKPKNDLVVLNSMIRGYVVNKDSESALRLLRALLKEGLRP 466

Query: 40  NPVTIASVLP 11
           + VT+ SVLP
Sbjct: 467 DHVTVVSVLP 476



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 37/138 (26%), Positives = 79/138 (57%)
 Frame = -2

Query: 427 YVLNFDVLSAVLSFQEMQLVHGMKPDEFGIMNVLEVVCCLDKCAGGRKGKSIHCFAMKNG 248
           YV+N D  SA+   + + L  G++PD   +++VL +    ++ +   +GK +H +A+++ 
Sbjct: 443 YVVNKDSESALRLLRAL-LKEGLRPDHVTVVSVLPLC---NQPSRLLQGKELHAYAIRHN 498

Query: 247 LDSEIKVQSSVLDMYCKCGNSDMGRYLFRLLDCKDIVSWSSIIAGHSQNFEYVESLALFL 68
           + S   V +++ DMYCKCG  ++   +F L+  ++ V+++++I+   ++    ++  LF 
Sbjct: 499 ISSCFSVTNALTDMYCKCGCLEIANKIFLLMTERNTVTYNTLISSLGKHGHADQAFILFD 558

Query: 67  EMLSLHVRPNPVTIASVL 14
            M    V P+ VT  ++L
Sbjct: 559 LMKRDGVSPDKVTFVALL 576



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
 Frame = -2

Query: 352 DEFGIMNVLEVVCCLDKCAGGRK-GKSIHCFAMKNGLDSEIKVQSSVLDMYCKCGNSDMG 176
           D F    VL+    L +   GRK  +++     +      + VQ +++DM+ KCG     
Sbjct: 160 DRFTYPPVLKACAALGEVEQGRKVQENVETDIARGIAKGNVFVQCALVDMFAKCGCLGEA 219

Query: 175 RYLFRLLDCKDIVSWSSIIAGHSQNFEYVESLALFLEMLSLHVRPNPVTIASVLP 11
           R +F  +  +D+ SW+++I G  +  +++E + L   M S   RP+ +  A+V+P
Sbjct: 220 RNMFESMGVRDLASWTAMIGGAVRGGDWLEVMTLLKRMKSEGFRPDSMIFATVIP 274


>gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  100 bits (248), Expect = 2e-19
 Identities = 51/139 (36%), Positives = 86/139 (61%)
 Frame = -2

Query: 427 YVLNFDVLSAVLSFQEMQLVHGMKPDEFGIMNVLEVVCCLDKCAGGRKGKSIHCFAMKNG 248
           Y  N     A+  F EMQ V+G+KP+   +++V+ V   L       +GK IHC+A+++G
Sbjct: 196 YSQNGQPYEALALFSEMQ-VNGIKPNSSTLVSVMPVCAHL---LALEQGKQIHCYAIRSG 251

Query: 247 LDSEIKVQSSVLDMYCKCGNSDMGRYLFRLLDCKDIVSWSSIIAGHSQNFEYVESLALFL 68
           ++S++ V + +++MY KCGN +    LF  +  +D+ SW++II G+S N ++ E+LA F 
Sbjct: 252 IESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFN 311

Query: 67  EMLSLHVRPNPVTIASVLP 11
            M    ++PN +T+ SVLP
Sbjct: 312 RMQVRGIKPNSITMVSVLP 330



 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 50/139 (35%), Positives = 84/139 (60%)
 Frame = -2

Query: 427 YVLNFDVLSAVLSFQEMQLVHGMKPDEFGIMNVLEVVCCLDKCAGGRKGKSIHCFAMKNG 248
           Y LN     A+  F  MQ V G+KP+   +++VL     L       +G+ IH +A+++G
Sbjct: 297 YSLNSQHHEALAFFNRMQ-VRGIKPNSITMVSVLPACAHLFAL---EQGQQIHGYAIRSG 352

Query: 247 LDSEIKVQSSVLDMYCKCGNSDMGRYLFRLLDCKDIVSWSSIIAGHSQNFEYVESLALFL 68
            +S   V +++++MY KCGN +    LF  +  K++V+W++II+G+SQ+    E+LALF+
Sbjct: 353 FESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFI 412

Query: 67  EMLSLHVRPNPVTIASVLP 11
           EM +  ++P+   I SVLP
Sbjct: 413 EMQAQGIKPDSFAIVSVLP 431



 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 48/139 (34%), Positives = 80/139 (57%)
 Frame = -2

Query: 427 YVLNFDVLSAVLSFQEMQLVHGMKPDEFGIMNVLEVVCCLDKCAGGRKGKSIHCFAMKNG 248
           YV N     A+  + +MQ   G+ PD+   ++V++          GRK   +H   +  G
Sbjct: 95  YVKNGFWNKALRLYYQMQRT-GINPDKLVFLSVIKACGSQSDLQAGRK---VHEDIIARG 150

Query: 247 LDSEIKVQSSVLDMYCKCGNSDMGRYLFRLLDCKDIVSWSSIIAGHSQNFEYVESLALFL 68
            +S++ V +++  MY KCG+ +  R +F  +  +D+VSW++IIAG+SQN +  E+LALF 
Sbjct: 151 FESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFS 210

Query: 67  EMLSLHVRPNPVTIASVLP 11
           EM    ++PN  T+ SV+P
Sbjct: 211 EMQVNGIKPNSSTLVSVMP 229



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
 Frame = -2

Query: 400 AVLSFQEMQLVHGMKPDEFGIMNVLEVVCCLDKCA---GGRKGKSIHCFAMKNGLDSEIK 230
           A+  F EMQ   G+KPD F I++VL        CA      +GK IH + +++G +S + 
Sbjct: 407 ALALFIEMQ-AQGIKPDSFAIVSVLPA------CAHFLALEQGKQIHGYTIRSGFESNVV 459

Query: 229 VQSSVLDMYCKCGNSDMGRYLFRLLDCKDIVSWSSIIAGHSQNFEYVESLALFLEMLSLH 50
           V + ++D+Y KCGN +  + LF  +  +D+VSW+++I  +  +    ++LALF +M    
Sbjct: 460 VGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETG 519

Query: 49  VRPNPVTIASVLPGFS 2
            + + +   ++L   S
Sbjct: 520 TKLDHIAFTAILTACS 535


>ref|XP_002273989.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37320-like [Vitis vinifera]
          Length = 510

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/110 (41%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
 Frame = -2

Query: 334 NVLEVVCCLDKCAGGR---KGKSIHCFAMKNGLDSEIKVQSSVLDMYCKCGNSDMGRYLF 164
           N L   C L  C GG    +G+S HC  ++ G DS + V ++++ MYCKCGN +   Y+F
Sbjct: 213 NDLTFTCLLSTCTGGGSLGRGRSAHCQTIEMGFDSYVHVANALISMYCKCGNVEDAYYIF 272

Query: 163 RLLDCKDIVSWSSIIAGHSQNFEYVESLALFLEMLSLHVRPNPVTIASVL 14
             +D KDIVSW+S+IAGH+Q+   V+++ LF EM    ++P+ +T   VL
Sbjct: 273 ERMDGKDIVSWNSMIAGHAQHGLAVQAIDLFEEMKKQKLKPDAITFLGVL 322



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
 Frame = -2

Query: 352 DEFGIMNVLEVVCCLDKCAGGRKGKS---IHCFAMKNGLDSEIKVQSSVLDMYCKCGNSD 182
           +E  I++   +   L  CA  R  KS    HC A++ G    + V S ++  Y KCG   
Sbjct: 106 EEESIVDASALSHALSLCASSRSLKSGVQFHCLAIRTGFVGNVYVGSCLISFYSKCGELC 165

Query: 181 MGRYLFRLLDCKDIVSWSSIIAGHSQNFEYVESLALFLEMLSLHVRPNPVTIASVL 14
               +F  +  K++VSW++IIAG +Q +     L L+  M +  ++PN +T   +L
Sbjct: 166 HAYRVFEEMPVKNVVSWTAIIAGFAQEWLVDGCLELYSRMRNSTLKPNDLTFTCLL 221


>emb|CBI32643.3| unnamed protein product [Vitis vinifera]
          Length = 1400

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/110 (41%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
 Frame = -2

Query: 334  NVLEVVCCLDKCAGGR---KGKSIHCFAMKNGLDSEIKVQSSVLDMYCKCGNSDMGRYLF 164
            N L   C L  C GG    +G+S HC  ++ G DS + V ++++ MYCKCGN +   Y+F
Sbjct: 1074 NDLTFTCLLSTCTGGGSLGRGRSAHCQTIEMGFDSYVHVANALISMYCKCGNVEDAYYIF 1133

Query: 163  RLLDCKDIVSWSSIIAGHSQNFEYVESLALFLEMLSLHVRPNPVTIASVL 14
              +D KDIVSW+S+IAGH+Q+   V+++ LF EM    ++P+ +T   VL
Sbjct: 1134 ERMDGKDIVSWNSMIAGHAQHGLAVQAIDLFEEMKKQKLKPDAITFLGVL 1183



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
 Frame = -2

Query: 352  DEFGIMNVLEVVCCLDKCAGGRKGKS---IHCFAMKNGLDSEIKVQSSVLDMYCKCGNSD 182
            +E  I++   +   L  CA  R  KS    HC A++ G    + V S ++  Y KCG   
Sbjct: 967  EEESIVDASALSHALSLCASSRSLKSGVQFHCLAIRTGFVGNVYVGSCLISFYSKCGELC 1026

Query: 181  MGRYLFRLLDCKDIVSWSSIIAGHSQNFEYVESLALFLEMLSLHVRPNPVTIASVL 14
                +F  +  K++VSW++IIAG +Q +     L L+  M +  ++PN +T   +L
Sbjct: 1027 HAYRVFEEMPVKNVVSWTAIIAGFAQEWLVDGCLELYSRMRNSTLKPNDLTFTCLL 1082


>ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
           gi|22293699|dbj|BAC10044.1| selenium-binding
           protein-like [Oryza sativa Japonica Group]
           gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa
           Japonica Group] gi|125601219|gb|EAZ40795.1| hypothetical
           protein OsJ_25273 [Oryza sativa Japonica Group]
          Length = 705

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/128 (38%), Positives = 81/128 (63%), Gaps = 2/128 (1%)
 Frame = -2

Query: 379 MQLVHGMKPDEFGIMNVLE--VVCCLDKCAGGRKGKSIHCFAMKNGLDSEIKVQSSVLDM 206
           + L + M+ + FG+ +++   V+    +    + G ++H  A+K+G   +I V ++++DM
Sbjct: 245 VDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDM 304

Query: 205 YCKCGNSDMGRYLFRLLDCKDIVSWSSIIAGHSQNFEYVESLALFLEMLSLHVRPNPVTI 26
           YCKCG  +M   LF   + KD+VSWSS+I G+SQN  +  S++LF EM+SL + PN  T+
Sbjct: 305 YCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTL 364

Query: 25  ASVLPGFS 2
           AS+LP  S
Sbjct: 365 ASILPCLS 372



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
 Frame = -2

Query: 364 GMKPDEFGIMNVLEVVCCLDKCAGGRKGKSIHCFAMKNGLDSEIKVQSSVLDMYCKCGNS 185
           G+ P+   + ++L    CL      R GK IHCF++++GL+    V S+++D+Y K G  
Sbjct: 356 GINPNSSTLASILP---CLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLI 412

Query: 184 DMGRYLFRLLDCKDIVSWSSIIAGHSQNFEYVESLALFLEML-SLHVRPNPVTIASVLP 11
            +   +F L   KD+  W+S++AG++ N  Y +S    L +L  + ++P+ VT+ SVLP
Sbjct: 413 RVAETIFWLTLDKDLAIWNSMVAGYAVN-GYSDSAFCALRLLQKVGLKPDHVTVVSVLP 470



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/138 (26%), Positives = 77/138 (55%)
 Frame = -2

Query: 427 YVLNFDVLSAVLSFQEMQLVHGMKPDEFGIMNVLEVVCCLDKCAGGRKGKSIHCFAMKNG 248
           Y +N    SA  + + +Q V G+KPD   +++VL +           +GK +H + +K  
Sbjct: 437 YAVNGYSDSAFCALRLLQKV-GLKPDHVTVVSVLPLCNQHHMLI---QGKELHAYVIKYC 492

Query: 247 LDSEIKVQSSVLDMYCKCGNSDMGRYLFRLLDCKDIVSWSSIIAGHSQNFEYVESLALFL 68
           ++S   V +++LDMYCKCG  ++ + +F+L+  ++ V+++ +I+   ++    ++L+ F 
Sbjct: 493 INSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFD 552

Query: 67  EMLSLHVRPNPVTIASVL 14
            M    + P+ VT  ++L
Sbjct: 553 LMKRDGIAPDKVTFVALL 570