BLASTX nr result

ID: Dioscorea21_contig00038862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038862
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE53118.1| hypothetical protein OsJ_35903 [Oryza sativa Japo...    39   4e-06
ref|XP_004168533.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma...    55   7e-06

>gb|EEE53118.1| hypothetical protein OsJ_35903 [Oryza sativa Japonica Group]
          Length = 165

 Score = 38.5 bits (88), Expect(2) = 4e-06
 Identities = 21/32 (65%), Positives = 23/32 (71%)
 Frame = -3

Query: 111 LLRKSRTRQLTYGSGAEPLHRGLGQHLYISQS 16
           LLRKSRTR LTYGSGAEP  +     +YI QS
Sbjct: 134 LLRKSRTRLLTYGSGAEPRVQFEVVDVYIGQS 165



 Score = 37.4 bits (85), Expect(2) = 4e-06
 Identities = 19/32 (59%), Positives = 22/32 (68%)
 Frame = -1

Query: 191 NEAAFLIAPLNRRAKAFSKSLIEGASTFLGRA 96
           +EAA LI PLNRRAKAFS   IEG    L ++
Sbjct: 107 HEAASLITPLNRRAKAFSNLFIEGGFDLLRKS 138


>ref|XP_004168533.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L2,
           mitochondrial-like [Cucumis sativus]
          Length = 455

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = -3

Query: 111 LLRKSRTRQLTYGSGAEPLHRGLGQHLYISQS 16
           +LRKSR RQLTYGSGAEP HR LGQHL+ SQS
Sbjct: 424 VLRKSRRRQLTYGSGAEPQHRDLGQHLFNSQS 455


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