BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038860
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522526.1| glutamate receptor 2 plant, putative [Ricinu...    67   1e-09
emb|CAN61321.1| hypothetical protein VITISV_012105 [Vitis vinifera]    67   1e-09
emb|CBI30645.3| unnamed protein product [Vitis vinifera]               67   2e-09
dbj|BAL15047.1| glutamate receptor 1.2 [Solanum lycopersicum]          64   2e-08
ref|XP_002324364.1| glutamate-gated kainate-type ion channel rec...    62   5e-08

>ref|XP_002522526.1| glutamate receptor 2 plant, putative [Ricinus communis]
           gi|223538217|gb|EEF39826.1| glutamate receptor 2 plant,
           putative [Ricinus communis]
          Length = 843

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 33/71 (46%), Positives = 46/71 (64%)
 Frame = +1

Query: 28  FSDDGAAFTKSSPLVADFNEAILQLLEDGTLKDLEKKWFSVIISNCPSTENYINTDGVTV 207
           F   G AF K SP+ AD ++AIL+L EDG+LK LE KWF+   S C S  N    + +++
Sbjct: 690 FGGLGFAFQKGSPIAADVSKAILKLSEDGSLKKLEDKWFTP-SSQCASNANDNRNESLSL 748

Query: 208 DNLWGLFLLTG 240
            N WGL+L++G
Sbjct: 749 QNFWGLYLISG 759


>emb|CAN61321.1| hypothetical protein VITISV_012105 [Vitis vinifera]
          Length = 637

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = +1

Query: 13  GAPLN-FSDDGAAFTKSSPLVADFNEAILQLLEDGTLKDLEKKWFSVIISNCPSTENYIN 189
           G PLN F   G AF K SPL ADF+EAIL L E G +K+LE KWF    + C +TE    
Sbjct: 448 GQPLNRFGGLGFAFQKGSPLAADFSEAILTLSEKGRIKELEDKWFP-RSAECSTTE---- 502

Query: 190 TDGVTVDNLWGLFLLTG 240
           TD +++ N W L+LL G
Sbjct: 503 TDELSLXNFWALYLLCG 519


>emb|CBI30645.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = +1

Query: 13  GAPLN-FSDDGAAFTKSSPLVADFNEAILQLLEDGTLKDLEKKWFSVIISNCPSTENYIN 189
           G PLN F   G AF K SPL ADF+EAIL L E G +K+LE KWF    + C +TE    
Sbjct: 254 GQPLNRFGGLGFAFQKGSPLAADFSEAILTLSEKGRIKELEDKWFP-RSAECSTTE---- 308

Query: 190 TDGVTVDNLWGLFLLTG 240
           TD +++ N W L+LL G
Sbjct: 309 TDELSLRNFWALYLLCG 325


>dbj|BAL15047.1| glutamate receptor 1.2 [Solanum lycopersicum]
          Length = 925

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/79 (40%), Positives = 47/79 (59%)
 Frame = +1

Query: 4   VLLGAPLNFSDDGAAFTKSSPLVADFNEAILQLLEDGTLKDLEKKWFSVIISNCPSTENY 183
           V+ G    F     AF K SPL  D +EAIL L +DGTL  LE+ WF+ +  NC + +  
Sbjct: 737 VVAGPNYRFGGLAFAFQKGSPLARDVSEAILTLTQDGTLNRLEEHWFA-LSKNCDNVDPT 795

Query: 184 INTDGVTVDNLWGLFLLTG 240
             T+ +T+ + WGL+L++G
Sbjct: 796 GETESLTLGSFWGLYLVSG 814


>ref|XP_002324364.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222865798|gb|EEF02929.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 869

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/67 (40%), Positives = 42/67 (62%)
 Frame = +1

Query: 40  GAAFTKSSPLVADFNEAILQLLEDGTLKDLEKKWFSVIISNCPSTENYINTDGVTVDNLW 219
           G AF K SPLV D + A+L + E   +K++E  WF    SNCP + N + ++ +++ + W
Sbjct: 745 GFAFPKGSPLVPDVSRAVLNMTEGDKMKEIENAWFGK-QSNCPDSSNSVTSNSLSLKSFW 803

Query: 220 GLFLLTG 240
           GLFL+ G
Sbjct: 804 GLFLIAG 810