BLASTX nr result

ID: Dioscorea21_contig00038834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038834
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   139   3e-31
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]   131   7e-29
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   130   9e-29
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   126   2e-27
gb|ABW74566.1| integrase [Boechera divaricarpa]                       124   8e-27

>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  139 bits (349), Expect = 3e-31
 Identities = 69/142 (48%), Positives = 96/142 (67%), Gaps = 1/142 (0%)
 Frame = +1

Query: 1   ASMVVEEKETSNLFMACXXXXXXXXTVWLVDSGCSNHMTGDRSLFQSLDEARKVSVRLGD 180
           A+     +E S LFMA          VW +DSGCSNHM+  +SLF+ LDE++K  VRLGD
Sbjct: 284 ANFTQNVEEESKLFMASSQITESANAVWFIDSGCSNHMSSSKSLFRDLDESQKSEVRLGD 343

Query: 181 DKEMKVEGVGTVCISTQSGE-KELHEVQFVPGLAHNLLSVGQLISKGYSVMFNQDSCLIT 357
           DK++ +EG GTV I T  G  K L++VQ+VP LAHNLLSVGQL++ GYSV+F  ++C I 
Sbjct: 344 DKQVHIEGKGTVEIKTVQGNVKFLYDVQYVPTLAHNLLSVGQLMTSGYSVVFYDNACDIK 403

Query: 358 DSQTKVPVIKIQKSRNNMFPVD 423
           D ++   + ++  ++N MFP+D
Sbjct: 404 DKESGRTIARVPMTQNKMFPLD 425


>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
          Length = 1109

 Score =  131 bits (329), Expect = 7e-29
 Identities = 63/142 (44%), Positives = 95/142 (66%), Gaps = 1/142 (0%)
 Frame = +1

Query: 1   ASMVVEEKETSNLFMACXXXXXXXXTVWLVDSGCSNHMTGDRSLFQSLDEARKVSVRLGD 180
           A+ V +E++   LFMA          +W +DSGCSNHMTG +SLF+ LDE+ K+ V+LGD
Sbjct: 265 ANYVEQEEDQVKLFMAYNEEVVXSNNIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLGD 324

Query: 181 DKEMKVEGVGTVCISTQSGE-KELHEVQFVPGLAHNLLSVGQLISKGYSVMFNQDSCLIT 357
           DK++ VEG GTV ++   G  K L+ V F+P L  NLLSVGQL+  GYS++F+  +C+I 
Sbjct: 325 DKQVXVEGKGTVAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGSTCVIK 384

Query: 358 DSQTKVPVIKIQKSRNNMFPVD 423
           D +    ++ ++ + N +FP++
Sbjct: 385 DKKFDQIIVDVRMAANKLFPLE 406


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  130 bits (328), Expect = 9e-29
 Identities = 61/142 (42%), Positives = 95/142 (66%), Gaps = 1/142 (0%)
 Frame = +1

Query: 1   ASMVVEEKETSNLFMACXXXXXXXXTVWLVDSGCSNHMTGDRSLFQSLDEARKVSVRLGD 180
           A+ V +E++   LFMA          +W +DSGCSNHMTG +SLF+ LDE+ K+ V+LGD
Sbjct: 264 ANYVEQEEDQVKLFMAYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLGD 323

Query: 181 DKEMKVEGVGTVCISTQSGE-KELHEVQFVPGLAHNLLSVGQLISKGYSVMFNQDSCLIT 357
           DK+++VEG GT  ++   G  K L+ V F+P L  NLLSVGQL+  GYS++F+  +C+I 
Sbjct: 324 DKQVQVEGKGTXAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIK 383

Query: 358 DSQTKVPVIKIQKSRNNMFPVD 423
           D ++   ++ ++ + N +FP++
Sbjct: 384 DKKSDQIIVBVRMAANKLFPLE 405


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/142 (41%), Positives = 93/142 (65%), Gaps = 1/142 (0%)
 Frame = +1

Query: 1   ASMVVEEKETSNLFMACXXXXXXXXTVWLVDSGCSNHMTGDRSLFQSLDEARKVSVRLGD 180
           A+ V +E++   LFM           +W +DSGCSNHMTG +SLF+ LDE+ K+ V+LGD
Sbjct: 279 ANYVEQEEDQVKLFMXYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLGD 338

Query: 181 DKEMKVEGVGTVCISTQSGE-KELHEVQFVPGLAHNLLSVGQLISKGYSVMFNQDSCLIT 357
           DK++ VEG G + ++   G  K L+ V F+P L  NLLSVGQL+  GYS++F+  +C+I 
Sbjct: 339 DKQVXVEGKGIMAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIK 398

Query: 358 DSQTKVPVIKIQKSRNNMFPVD 423
           D ++   ++ ++ + N +FP++
Sbjct: 399 DKKSDQIIVNVRMAANKLFPLE 420


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  124 bits (311), Expect = 8e-27
 Identities = 61/142 (42%), Positives = 94/142 (66%), Gaps = 1/142 (0%)
 Frame = +1

Query: 1   ASMVVEEKETSNLFMACXXXXXXXXTVWLVDSGCSNHMTGDRSLFQSLDEARKVSVRLGD 180
           A  V +E E   LFMA         +VW +DSGCSNHMTG +S F+ LDE+ K+ V+LG+
Sbjct: 121 ACFVEQENEQPRLFMA-FESEEASKSVWYLDSGCSNHMTGTKSSFKELDESHKLKVKLGN 179

Query: 181 DKEMKVEGVGTVCISTQSGE-KELHEVQFVPGLAHNLLSVGQLISKGYSVMFNQDSCLIT 357
           DKE++VEG G V +    G  K ++ V ++P LAHNLLSVGQ++    SV+F+ + C+I 
Sbjct: 180 DKEVQVEGRGVVAVHNGHGNLKLIYGVYYIPDLAHNLLSVGQMVENNCSVLFDGNECVIK 239

Query: 358 DSQTKVPVIKIQKSRNNMFPVD 423
           + ++ V +  ++K+ NN++P++
Sbjct: 240 EKKSGVTLAMVKKTSNNLYPLE 261


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