BLASTX nr result

ID: Dioscorea21_contig00038798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038798
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305884.1| condensin complex components subunit [Populu...   127   7e-28
ref|XP_004172144.1| PREDICTED: condensin complex subunit 3-like ...   122   2e-26
ref|XP_004153102.1| PREDICTED: condensin complex subunit 3-like,...   122   2e-26
ref|XP_003552880.1| PREDICTED: condensin complex subunit 3-like ...   122   2e-26
ref|XP_003537443.1| PREDICTED: condensin complex subunit 3-like ...   122   2e-26

>ref|XP_002305884.1| condensin complex components subunit [Populus trichocarpa]
           gi|222848848|gb|EEE86395.1| condensin complex components
           subunit [Populus trichocarpa]
          Length = 289

 Score =  127 bits (320), Expect = 7e-28
 Identities = 64/87 (73%), Positives = 75/87 (86%)
 Frame = -3

Query: 263 SSRFRACQIISEIIMLLPDDAEVSDEVWDDVIESMKQRLEDKVPGIRAFAVRALSRFAND 84
           S RFRACQIISEII+ LPDDAEVS+E+WD VIESMK R+ DKVP IR FAVRALSRFAND
Sbjct: 10  SVRFRACQIISEIILRLPDDAEVSNELWDVVIESMKLRVADKVPAIRTFAVRALSRFAND 69

Query: 83  VDNAEIVNLFLETLPQESSADVRKAIV 3
            +N++I++LFLE LP E +A+VRK IV
Sbjct: 70  TENSDILDLFLEVLPLEQNAEVRKTIV 96


>ref|XP_004172144.1| PREDICTED: condensin complex subunit 3-like [Cucumis sativus]
          Length = 271

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/87 (67%), Positives = 72/87 (82%)
 Frame = -3

Query: 263 SSRFRACQIISEIIMLLPDDAEVSDEVWDDVIESMKQRLEDKVPGIRAFAVRALSRFAND 84
           S+RFRACQI+SEIIM LPDDAEVS E WD VI+ MK R++DKVP +R FAVRALSRFAND
Sbjct: 124 SARFRACQIVSEIIMRLPDDAEVSSEFWDKVIDHMKVRVQDKVPLVRMFAVRALSRFAND 183

Query: 83  VDNAEIVNLFLETLPQESSADVRKAIV 3
            +N +I+NLFLE +P E + +VRK I+
Sbjct: 184 SENGDILNLFLEVIPMEQNPEVRKTIL 210


>ref|XP_004153102.1| PREDICTED: condensin complex subunit 3-like, partial [Cucumis
           sativus]
          Length = 251

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/87 (67%), Positives = 72/87 (82%)
 Frame = -3

Query: 263 SSRFRACQIISEIIMLLPDDAEVSDEVWDDVIESMKQRLEDKVPGIRAFAVRALSRFAND 84
           S+RFRACQI+SEIIM LPDDAEVS E WD VI+ MK R++DKVP +R FAVRALSRFAND
Sbjct: 124 SARFRACQIVSEIIMRLPDDAEVSSEFWDKVIDHMKVRVQDKVPLVRMFAVRALSRFAND 183

Query: 83  VDNAEIVNLFLETLPQESSADVRKAIV 3
            +N +I+NLFLE +P E + +VRK I+
Sbjct: 184 SENGDILNLFLEVIPMEQNPEVRKTIL 210


>ref|XP_003552880.1| PREDICTED: condensin complex subunit 3-like [Glycine max]
          Length = 1096

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/87 (67%), Positives = 74/87 (85%)
 Frame = -3

Query: 263 SSRFRACQIISEIIMLLPDDAEVSDEVWDDVIESMKQRLEDKVPGIRAFAVRALSRFAND 84
           ++RFRACQI+SEII+ LPDDAEVS+E+WD+VIE MK R+ DK+P +R FAVRALSRF ND
Sbjct: 174 TARFRACQIVSEIILRLPDDAEVSNEIWDEVIEWMKVRVRDKIPVVRTFAVRALSRFVND 233

Query: 83  VDNAEIVNLFLETLPQESSADVRKAIV 3
             N++I++LFLE LP E +ADVRK IV
Sbjct: 234 SVNSDILDLFLEVLPLEQNADVRKMIV 260


>ref|XP_003537443.1| PREDICTED: condensin complex subunit 3-like [Glycine max]
          Length = 1033

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/87 (67%), Positives = 74/87 (85%)
 Frame = -3

Query: 263 SSRFRACQIISEIIMLLPDDAEVSDEVWDDVIESMKQRLEDKVPGIRAFAVRALSRFAND 84
           ++RFRACQI+SEII+ LPDDAEVS+E+WD+VIE MK R+ DK+P +R FAVRALSRF ND
Sbjct: 111 TARFRACQIVSEIILRLPDDAEVSNEIWDEVIEWMKVRVRDKIPVVRTFAVRALSRFVND 170

Query: 83  VDNAEIVNLFLETLPQESSADVRKAIV 3
             N++I++LFLE LP E +ADVRK IV
Sbjct: 171 SVNSDILDLFLEVLPLEQNADVRKMIV 197


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