BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038784
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525999.1| pentatricopeptide repeat-containing protein,...    94   1e-17
ref|NP_178283.1| pentatricopeptide repeat-containing protein [Ar...    88   8e-16
ref|XP_002876773.1| pentatricopeptide repeat-containing protein ...    83   3e-14
ref|XP_004142302.1| PREDICTED: pentatricopeptide repeat-containi...    75   4e-12
ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    67   1e-09

>ref|XP_002525999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534731|gb|EEF36423.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 557

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 42/93 (45%), Positives = 64/93 (68%)
 Frame = +3

Query: 3   KKGDLDAAMRYFNEMHGRGNQLDVKGYGVVISGFCSNGQLDRALAVKQEMEKRNLVADKV 182
           KKG++D AM+YF+EM     +LD+  YGVVISG  +NG+LD+ L V ++M +  L  DKV
Sbjct: 193 KKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMEDMVRNGLAPDKV 252

Query: 183 ILTVVMCAYFRAGDVKKGLCLFDEMIGNGIDPD 281
           +LT +M A+F+AG+ K    ++ E++  G +PD
Sbjct: 253 VLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPD 285


>ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g01740 gi|4220475|gb|AAD12698.1| hypothetical protein
           [Arabidopsis thaliana] gi|330250397|gb|AEC05491.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 559

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 39/93 (41%), Positives = 63/93 (67%)
 Frame = +3

Query: 3   KKGDLDAAMRYFNEMHGRGNQLDVKGYGVVISGFCSNGQLDRALAVKQEMEKRNLVADKV 182
           ++GD D AM++  +M  +G +LD+  YGV+ISG C NG+L  A  + ++MEK +LV D V
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339

Query: 183 ILTVVMCAYFRAGDVKKGLCLFDEMIGNGIDPD 281
           I T +M AYF++G +K  + ++ ++I  G +PD
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPD 372


>ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322611|gb|EFH53032.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 559

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 37/93 (39%), Positives = 62/93 (66%)
 Frame = +3

Query: 3   KKGDLDAAMRYFNEMHGRGNQLDVKGYGVVISGFCSNGQLDRALAVKQEMEKRNLVADKV 182
           ++GD D AM++  +M  +G +LD+  YGV+ISG C  G+L  A  + ++MEK +LV D +
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMM 339

Query: 183 ILTVVMCAYFRAGDVKKGLCLFDEMIGNGIDPD 281
           I T +M AYF++G +K  + ++ ++I  G +PD
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPD 372


>ref|XP_004142302.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01740-like [Cucumis sativus]
           gi|449521427|ref|XP_004167731.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g01740-like [Cucumis sativus]
          Length = 585

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 33/93 (35%), Positives = 60/93 (64%)
 Frame = +3

Query: 3   KKGDLDAAMRYFNEMHGRGNQLDVKGYGVVISGFCSNGQLDRALAVKQEMEKRNLVADKV 182
           KKG++D A++Y N+M  R  +LD+  Y V+ISGF   G+ D+++   + + K  L+ D++
Sbjct: 278 KKGNVDDAIKYINQMFDRDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRI 337

Query: 183 ILTVVMCAYFRAGDVKKGLCLFDEMIGNGIDPD 281
           ILT +M  +F+AG++K+ L  +  ++  G + D
Sbjct: 338 ILTAIMDVHFKAGNIKEALNAYKILLAKGFEAD 370


>ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/92 (35%), Positives = 52/92 (56%)
 Frame = +3

Query: 3   KKGDLDAAMRYFNEMHGRGNQLDVKGYGVVISGFCSNGQLDRALAVKQEMEKRNLVADKV 182
           K G+LD A    +EM  +G QL+V  Y  +++G C  G +++A+ + +EME   +  D +
Sbjct: 480 KHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAI 539

Query: 183 ILTVVMCAYFRAGDVKKGLCLFDEMIGNGIDP 278
             T V+ AY R GD+ K   L  EM+  G+ P
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP 571



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/93 (33%), Positives = 49/93 (52%)
 Frame = +3

Query: 3   KKGDLDAAMRYFNEMHGRGNQLDVKGYGVVISGFCSNGQLDRALAVKQEMEKRNLVADKV 182
           K G++  A    NEM   G   ++  YG +I G C +G+LD A  +  EM K+ L  +  
Sbjct: 445 KAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVC 504

Query: 183 ILTVVMCAYFRAGDVKKGLCLFDEMIGNGIDPD 281
           I   ++    +AG++++ + L  EM   GIDPD
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD 537