BLASTX nr result

ID: Dioscorea21_contig00038771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038771
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001049474.1| Os03g0233500 [Oryza sativa Japonica Group] g...    83   3e-14
ref|XP_002465615.1| hypothetical protein SORBIDRAFT_01g042240 [S...    82   3e-14
gb|AAM19129.1|AC103891_9 Putative RING zinc finger protein [Oryz...    82   3e-14
gb|AFW89121.1| putative RING zinc finger domain superfamily prot...    82   4e-14
ref|XP_003561869.1| PREDICTED: probable E3 ubiquitin-protein lig...    79   4e-13

>ref|NP_001049474.1| Os03g0233500 [Oryza sativa Japonica Group]
           gi|108707022|gb|ABF94817.1| IBR domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|113547945|dbj|BAF11388.1| Os03g0233500 [Oryza sativa
           Japonica Group] gi|222624522|gb|EEE58654.1| hypothetical
           protein OsJ_10043 [Oryza sativa Japonica Group]
          Length = 612

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/69 (57%), Positives = 51/69 (73%)
 Frame = +1

Query: 178 TVIAEKSLLTMQMEDLQKIIEFLSLSESSARILLIHYRWDVTRILELFDRKGKEQLFLEA 357
           +VI ++SLL  Q EDL+K++E L L E  AR LLIHYRWDV RI EL D+KG+++LF EA
Sbjct: 58  SVITKESLLAAQREDLRKVMELLGLREHHARTLLIHYRWDVERIFELLDQKGRDRLFSEA 117

Query: 358 GLVLDDNNN 384
           G+ L   NN
Sbjct: 118 GIPLQPANN 126


>ref|XP_002465615.1| hypothetical protein SORBIDRAFT_01g042240 [Sorghum bicolor]
           gi|241919469|gb|EER92613.1| hypothetical protein
           SORBIDRAFT_01g042240 [Sorghum bicolor]
          Length = 604

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 40/68 (58%), Positives = 50/68 (73%)
 Frame = +1

Query: 181 VIAEKSLLTMQMEDLQKIIEFLSLSESSARILLIHYRWDVTRILELFDRKGKEQLFLEAG 360
           VI ++SLL  Q EDL+K++E L L E  AR LLIHYRWDV RI EL D+KG+++LF EAG
Sbjct: 59  VITKESLLAAQREDLRKVMELLGLREHHARTLLIHYRWDVERIFELLDQKGRDRLFSEAG 118

Query: 361 LVLDDNNN 384
           + L   NN
Sbjct: 119 IPLQYTNN 126


>gb|AAM19129.1|AC103891_9 Putative RING zinc finger protein [Oryza sativa Japonica Group]
          Length = 624

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 40/68 (58%), Positives = 50/68 (73%)
 Frame = +1

Query: 181 VIAEKSLLTMQMEDLQKIIEFLSLSESSARILLIHYRWDVTRILELFDRKGKEQLFLEAG 360
           VI ++SLL  Q EDL+K++E L L E  AR LLIHYRWDV RI EL D+KG+++LF EAG
Sbjct: 90  VITKESLLAAQREDLRKVMELLGLREHHARTLLIHYRWDVERIFELLDQKGRDRLFSEAG 149

Query: 361 LVLDDNNN 384
           + L   NN
Sbjct: 150 IPLQPANN 157


>gb|AFW89121.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 618

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 40/68 (58%), Positives = 49/68 (72%)
 Frame = +1

Query: 181 VIAEKSLLTMQMEDLQKIIEFLSLSESSARILLIHYRWDVTRILELFDRKGKEQLFLEAG 360
           VI ++SLL  Q EDL+K++E L L E  AR LLIHYRWDV RI EL D+KG++ LF EAG
Sbjct: 58  VITKESLLAAQKEDLRKVMELLGLREHHARTLLIHYRWDVERIFELLDQKGRDSLFSEAG 117

Query: 361 LVLDDNNN 384
           + L   NN
Sbjct: 118 IPLQYTNN 125


>ref|XP_003561869.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI2-like
           [Brachypodium distachyon]
          Length = 619

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/69 (56%), Positives = 50/69 (72%)
 Frame = +1

Query: 178 TVIAEKSLLTMQMEDLQKIIEFLSLSESSARILLIHYRWDVTRILELFDRKGKEQLFLEA 357
           +VI ++ LL  Q EDL+K+IE L L E  AR LLIHYRWDV RI EL D+KG+++LF EA
Sbjct: 59  SVITKEYLLGAQKEDLRKMIELLGLKEHHARTLLIHYRWDVERIFELLDQKGRDRLFSEA 118

Query: 358 GLVLDDNNN 384
           G+ L   +N
Sbjct: 119 GIPLRSTSN 127


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