BLASTX nr result

ID: Dioscorea21_contig00038749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038749
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002439213.1| hypothetical protein SORBIDRAFT_09g002330 [S...    60   1e-07

>ref|XP_002439213.1| hypothetical protein SORBIDRAFT_09g002330 [Sorghum bicolor]
           gi|241944498|gb|EES17643.1| hypothetical protein
           SORBIDRAFT_09g002330 [Sorghum bicolor]
          Length = 871

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 38/120 (31%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
 Frame = -2

Query: 357 VPLLSVLPDICLPDQSSCSCGIDINSQVLCAGTGFICKPC--NQFXXXXXXXXXXXXXXX 184
           VPL  + P +C+ + S+C CGI   SQ  C G+G ICK    +                 
Sbjct: 327 VPLPKIRPGVCVSNDSTCRCGIMSGSQQFCGGSGVICKALCEDSTPPPASPPLPPPPPAP 386

Query: 183 LRTTRKKSKWNYASXXXXXXXXXXXVCSLFYLMFTCVCRRKKVHNSVQP---TTTPGAGA 13
             ++R+ +K   A            +CS+ Y +    C  K+VHNSVQP    T  GAGA
Sbjct: 387 SSSSRRVAKAWIAFCVVGAVGGFAGLCSIVYCLVFGFCSNKRVHNSVQPNLGATAAGAGA 446


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