BLASTX nr result
ID: Dioscorea21_contig00038729
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00038729
(443 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containi... 183 1e-44
emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera] 183 1e-44
gb|AAF43948.1|AC012188_25 Contains similarity to a hypothetical ... 181 4e-44
ref|NP_172899.1| pentatricopeptide repeat-containing protein [Ar... 181 4e-44
ref|XP_002890056.1| hypothetical protein ARALYDRAFT_888825 [Arab... 173 1e-41
>ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 183 bits (465), Expect = 1e-44
Identities = 87/149 (58%), Positives = 115/149 (77%), Gaps = 2/149 (1%)
Frame = +1
Query: 1 LGLMSDRYIRNAVLCYYAKYGPFLCALSLFDEMSD--RGIVDWNSMLSGFWKWSSKEDAC 174
LG SD ++RNAV+ YA+ GP A +FDE+ D R + DWN+M+SG+WKW S+ A
Sbjct: 124 LGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQ 183
Query: 175 KVFDEMPERNVVSWTVMVSGLARAGELEEARRVFELMPERSVVSWNAVLSGYVKNGLPDE 354
+FD MPERNV++WT MV+G A+ +LE ARR F+ MPERSVVSWNA+LSGY +NGL +E
Sbjct: 184 WLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEE 243
Query: 355 CLFLFNKMMNSGIRPNETSWVTVISACAS 441
L LF++M+N+GI P+ET+WVTVISAC+S
Sbjct: 244 ALRLFDEMVNAGIEPDETTWVTVISACSS 272
Score = 85.1 bits (209), Expect = 5e-15
Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 40/174 (22%)
Frame = +1
Query: 34 AVLCYYAKYGPFLCALSLFDEMSDRGIVDWNSMLSGFWKWSSKEDACKVFDEMPERNV-- 207
A++ YAK A FD M +R +V WN+MLSG+ + E+A ++FDEM +
Sbjct: 199 AMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEP 258
Query: 208 --VSWTVMVSGL-----------------------------------ARAGELEEARRVF 276
+W ++S A+ G+L+ AR++F
Sbjct: 259 DETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLF 318
Query: 277 ELMPERSVVSWNAVLSGYVKNGLPDECLFLFNKMMNS-GIRPNETSWVTVISAC 435
MP R+VV+WN++++GY +NG + LF +M+ + + P+E + V+VISAC
Sbjct: 319 NTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISAC 372
Score = 81.6 bits (200), Expect = 6e-14
Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 40/179 (22%)
Frame = +1
Query: 22 YIRNAVLCYYAKYGPFLCALSLFDEMSDRGIVDWNSMLSGFWKWSSKEDACKVFDEM--- 192
++R A+L YAK+G A LF+ M R +V WNSM++G+ + A ++F EM
Sbjct: 296 FVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITA 355
Query: 193 -----PERNVVS---------------WTV-----------------MVSGLARAGELEE 261
E +VS W V M+ +R G +E+
Sbjct: 356 KKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMED 415
Query: 262 ARRVFELMPERSVVSWNAVLSGYVKNGLPDECLFLFNKMMNSGIRPNETSWVTVISACA 438
A+RVF+ M R VVS+N ++SG+ +G E + L + M GI P+ +++ V++AC+
Sbjct: 416 AKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACS 474
>emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 183 bits (464), Expect = 1e-44
Identities = 87/149 (58%), Positives = 115/149 (77%), Gaps = 2/149 (1%)
Frame = +1
Query: 1 LGLMSDRYIRNAVLCYYAKYGPFLCALSLFDEMSD--RGIVDWNSMLSGFWKWSSKEDAC 174
LG SD ++RNAV+ YA+ GP A +FDE+ D R + DWN+M+SG+WKW S+ A
Sbjct: 124 LGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQ 183
Query: 175 KVFDEMPERNVVSWTVMVSGLARAGELEEARRVFELMPERSVVSWNAVLSGYVKNGLPDE 354
+FD MPERNV++WT MV+G A+ +LE ARR F+ MPERSVVSWNA+LSGY +NGL +E
Sbjct: 184 WLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEE 243
Query: 355 CLFLFNKMMNSGIRPNETSWVTVISACAS 441
L LF++M+N+GI P+ET+WVTVISAC+S
Sbjct: 244 VLRLFDEMVNAGIEPDETTWVTVISACSS 272
Score = 81.3 bits (199), Expect = 8e-14
Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 44/179 (24%)
Frame = +1
Query: 31 NAVLCYYAKYGPFLCALSLFDEMSDRGI----VDWNSMLSGFWKWSSKEDAC-------- 174
NA+L YA+ G L LFDEM + GI W +++S SS+ D C
Sbjct: 229 NAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISAC---SSRGDPCLAASLVRT 285
Query: 175 ------------------------------KVFDEMPE-RNVVSWTVMVSGLARAGELEE 261
++FDE+ RN V+W M+S R G L+
Sbjct: 286 LHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDS 345
Query: 262 ARRVFELMPERSVVSWNAVLSGYVKNGLPDECLFLFNKMMNS-GIRPNETSWVTVISAC 435
AR +F MP R+VV+WN++++GY +NG + LF +M+ + + P+E + V+VISAC
Sbjct: 346 ARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISAC 404
Score = 75.5 bits (184), Expect = 4e-12
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 40/186 (21%)
Frame = +1
Query: 1 LGLMSDRYIRNAVLCYYAKYGPFLCALSLFDEMSDRGIVDWNSMLSGFWKWSSKEDACKV 180
LG + NA++ Y + G A LF+ M R +V WNSM++G+ + A ++
Sbjct: 321 LGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIEL 380
Query: 181 FDEM--------PERNVVS---------------WTV-----------------MVSGLA 240
F EM E +VS W V M+ +
Sbjct: 381 FKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYS 440
Query: 241 RAGELEEARRVFELMPERSVVSWNAVLSGYVKNGLPDECLFLFNKMMNSGIRPNETSWVT 420
R G +E+A+RVF+ M R VVS+N ++SG+ +G E + L + M GI P+ +++
Sbjct: 441 RCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIG 500
Query: 421 VISACA 438
V++AC+
Sbjct: 501 VLTACS 506
>gb|AAF43948.1|AC012188_25 Contains similarity to a hypothetical protein from Arabidopsis
thaliana gb|AC004044.1 and contains two domains PF|01535
of unknown function [Arabidopsis thaliana]
Length = 455
Score = 181 bits (460), Expect = 4e-44
Identities = 80/146 (54%), Positives = 108/146 (73%)
Frame = +1
Query: 1 LGLMSDRYIRNAVLCYYAKYGPFLCALSLFDEMSDRGIVDWNSMLSGFWKWSSKEDACKV 180
LG D Y+RN ++ Y K+ A +FD++S R DWN M+SG+WKW +KE+ACK+
Sbjct: 45 LGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKL 104
Query: 181 FDEMPERNVVSWTVMVSGLARAGELEEARRVFELMPERSVVSWNAVLSGYVKNGLPDECL 360
FD MPE +VVSWTVM++G A+ +LE AR+ F+ MPE+SVVSWNA+LSGY +NG ++ L
Sbjct: 105 FDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDAL 164
Query: 361 FLFNKMMNSGIRPNETSWVTVISACA 438
LFN M+ G+RPNET+WV VISAC+
Sbjct: 165 RLFNDMLRLGVRPNETTWVIVISACS 190
Score = 81.6 bits (200), Expect = 6e-14
Identities = 36/93 (38%), Positives = 65/93 (69%), Gaps = 2/93 (2%)
Frame = +1
Query: 163 EDACKVFDEM-PERNVVSWTVMVSGLARAGELEEARRVFELMPERSVVSWNAVLSGYVKN 339
+ A ++F+E+ +RN+V+W M+SG R G++ AR++F+ MP+R+VVSWN++++GY N
Sbjct: 231 QSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHN 290
Query: 340 GLPDECLFLFNKMMNSG-IRPNETSWVTVISAC 435
G + F M++ G +P+E + ++V+SAC
Sbjct: 291 GQAALAIEFFEDMIDYGDSKPDEVTMISVLSAC 323
Score = 74.7 bits (182), Expect = 7e-12
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 40/185 (21%)
Frame = +1
Query: 1 LGLMSDRYIRNAVLCYYAKYGPFLCALSLFDEMSDRGIVDWNSMLSGFWKWSSKEDACKV 180
LG + NA++ Y + G A LFD M R +V WNS+++G+ A +
Sbjct: 240 LGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEF 299
Query: 181 FDEM-------PER---------------------------------NVVSWTVMVSGLA 240
F++M P+ N + ++ A
Sbjct: 300 FEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYA 359
Query: 241 RAGELEEARRVFELMPERSVVSWNAVLSGYVKNGLPDECLFLFNKMMNSGIRPNETSWVT 420
R G L EA+RVF+ M ER VVS+N + + + NG E L L +KM + GI P+ ++ +
Sbjct: 360 RGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTS 419
Query: 421 VISAC 435
V++AC
Sbjct: 420 VLTAC 424
Score = 63.5 bits (153), Expect = 2e-08
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Frame = +1
Query: 22 YIRNAVLCYYAKYGPFLCALSLFDEM-SDRGIVDWNSMLSGFWKWSSKEDACKVFDEMPE 198
+++ A+L +AK A +F+E+ + R +V WN+M+SG+ + A ++FD MP+
Sbjct: 215 FVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPK 274
Query: 199 RNVVSWTVMVSGLARAGELEEARRVFELM 285
RNVVSW +++G A G+ A FE M
Sbjct: 275 RNVVSWNSLIAGYAHNGQAALAIEFFEDM 303
>ref|NP_172899.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806395|sp|Q9M9R6.2|PPR43_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g14470 gi|332191047|gb|AEE29168.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 540
Score = 181 bits (460), Expect = 4e-44
Identities = 80/146 (54%), Positives = 108/146 (73%)
Frame = +1
Query: 1 LGLMSDRYIRNAVLCYYAKYGPFLCALSLFDEMSDRGIVDWNSMLSGFWKWSSKEDACKV 180
LG D Y+RN ++ Y K+ A +FD++S R DWN M+SG+WKW +KE+ACK+
Sbjct: 130 LGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKL 189
Query: 181 FDEMPERNVVSWTVMVSGLARAGELEEARRVFELMPERSVVSWNAVLSGYVKNGLPDECL 360
FD MPE +VVSWTVM++G A+ +LE AR+ F+ MPE+SVVSWNA+LSGY +NG ++ L
Sbjct: 190 FDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDAL 249
Query: 361 FLFNKMMNSGIRPNETSWVTVISACA 438
LFN M+ G+RPNET+WV VISAC+
Sbjct: 250 RLFNDMLRLGVRPNETTWVIVISACS 275
Score = 81.6 bits (200), Expect = 6e-14
Identities = 36/93 (38%), Positives = 65/93 (69%), Gaps = 2/93 (2%)
Frame = +1
Query: 163 EDACKVFDEM-PERNVVSWTVMVSGLARAGELEEARRVFELMPERSVVSWNAVLSGYVKN 339
+ A ++F+E+ +RN+V+W M+SG R G++ AR++F+ MP+R+VVSWN++++GY N
Sbjct: 316 QSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHN 375
Query: 340 GLPDECLFLFNKMMNSG-IRPNETSWVTVISAC 435
G + F M++ G +P+E + ++V+SAC
Sbjct: 376 GQAALAIEFFEDMIDYGDSKPDEVTMISVLSAC 408
Score = 74.7 bits (182), Expect = 7e-12
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 40/185 (21%)
Frame = +1
Query: 1 LGLMSDRYIRNAVLCYYAKYGPFLCALSLFDEMSDRGIVDWNSMLSGFWKWSSKEDACKV 180
LG + NA++ Y + G A LFD M R +V WNS+++G+ A +
Sbjct: 325 LGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEF 384
Query: 181 FDEM-------PER---------------------------------NVVSWTVMVSGLA 240
F++M P+ N + ++ A
Sbjct: 385 FEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYA 444
Query: 241 RAGELEEARRVFELMPERSVVSWNAVLSGYVKNGLPDECLFLFNKMMNSGIRPNETSWVT 420
R G L EA+RVF+ M ER VVS+N + + + NG E L L +KM + GI P+ ++ +
Sbjct: 445 RGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTS 504
Query: 421 VISAC 435
V++AC
Sbjct: 505 VLTAC 509
Score = 63.5 bits (153), Expect = 2e-08
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Frame = +1
Query: 22 YIRNAVLCYYAKYGPFLCALSLFDEM-SDRGIVDWNSMLSGFWKWSSKEDACKVFDEMPE 198
+++ A+L +AK A +F+E+ + R +V WN+M+SG+ + A ++FD MP+
Sbjct: 300 FVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPK 359
Query: 199 RNVVSWTVMVSGLARAGELEEARRVFELM 285
RNVVSW +++G A G+ A FE M
Sbjct: 360 RNVVSWNSLIAGYAHNGQAALAIEFFEDM 388
>ref|XP_002890056.1| hypothetical protein ARALYDRAFT_888825 [Arabidopsis lyrata subsp.
lyrata] gi|297335898|gb|EFH66315.1| hypothetical protein
ARALYDRAFT_888825 [Arabidopsis lyrata subsp. lyrata]
Length = 790
Score = 173 bits (439), Expect = 1e-41
Identities = 80/148 (54%), Positives = 110/148 (74%), Gaps = 2/148 (1%)
Frame = +1
Query: 1 LGLMSDRYIRNAVLCYYAKYGPFLCALSLFDEMSDRGIVDWNSMLSGFWKWSSKEDACKV 180
+G+ D Y+RN ++ YAK+ A +FD+++ R DWN M+SG+WK+ +KE+ACK+
Sbjct: 130 MGIFKDPYVRNVIMDMYAKHESVESARKVFDQITHRKGSDWNVMISGYWKYGNKEEACKL 189
Query: 181 FDEMPER--NVVSWTVMVSGLARAGELEEARRVFELMPERSVVSWNAVLSGYVKNGLPDE 354
FD MPE +VVSWTVM++G A+ +LE ARR F+ MPE+SVVSWNA+LSGY +NG +E
Sbjct: 190 FDMMPEGKIDVVSWTVMITGFAKLKDLENARRCFDCMPEKSVVSWNAMLSGYSQNGFTEE 249
Query: 355 CLFLFNKMMNSGIRPNETSWVTVISACA 438
L LFN M+ G+RPNET+WV VISAC+
Sbjct: 250 TLRLFNDMLRLGVRPNETTWVIVISACS 277
Score = 84.0 bits (206), Expect = 1e-14
Identities = 37/91 (40%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Frame = +1
Query: 169 ACKVFDEM-PERNVVSWTVMVSGLARAGELEEARRVFELMPERSVVSWNAVLSGYVKNGL 345
A ++F+E+ ++N+V+W M+SG R G++ AR++F+ MP+R+VVSWN+V++GY NG
Sbjct: 320 ARRIFNELGTQKNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSVIAGYAHNGQ 379
Query: 346 PDECLFLFNKMMNSG-IRPNETSWVTVISAC 435
P + F M++ G +P+E + ++V+SAC
Sbjct: 380 PALAIEFFEDMIDYGDSKPDEVTMISVLSAC 410
Score = 74.3 bits (181), Expect = 1e-11
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 40/185 (21%)
Frame = +1
Query: 1 LGLMSDRYIRNAVLCYYAKYGPFLCALSLFDEMSDRGIVDWNSMLSGFWKWSSKEDACKV 180
LG + NA++ Y + G A LFD M R +V WNS+++G+ A +
Sbjct: 327 LGTQKNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSVIAGYAHNGQPALAIEF 386
Query: 181 FDEM-------PER---------------------------------NVVSWTVMVSGLA 240
F++M P+ N + ++ A
Sbjct: 387 FEDMIDYGDSKPDEVTMISVLSACGHMGDLELGDCIVDYIGKKQIKLNDSGYRSLIFMYA 446
Query: 241 RAGELEEARRVFELMPERSVVSWNAVLSGYVKNGLPDECLFLFNKMMNSGIRPNETSWVT 420
R G L EA+RVF+ M ER VVS+N + S + NG + L L +KM + GI P+ ++ +
Sbjct: 447 RCGNLWEAKRVFDEMKERDVVSYNTLFSAFAANGDGVKTLNLLSKMKDEGIEPDRVTYTS 506
Query: 421 VISAC 435
V++AC
Sbjct: 507 VLTAC 511