BLASTX nr result

ID: Dioscorea21_contig00038669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038669
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH60859.1| ornithine decarboxylase [Populus nigra]               166   2e-39
gb|AEQ02350.1| ornithine decarboxylase [Erythroxylum coca]            163   2e-38
ref|XP_002307756.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
ref|XP_002510611.1| ornithine decarboxylase, putative [Ricinus c...   159   3e-37
gb|ABN04356.1| putative ornithine decarboxylase [Theobroma cacao]     158   4e-37

>emb|CAH60859.1| ornithine decarboxylase [Populus nigra]
          Length = 200

 Score =  166 bits (419), Expect = 2e-39
 Identities = 81/132 (61%), Positives = 103/132 (78%)
 Frame = +3

Query: 3   KKHHPKCSLLLRLKAPDDSGARRRLGTKYGALPEEVEPLILAAKEAELKVIGVSFHVGSG 182
           +K H KC+LL+R+KAPDDSGAR  LG KYGALPEEV PL+ AA+ A L V+GVSFH+GSG
Sbjct: 35  RKWHSKCALLIRIKAPDDSGARCPLGPKYGALPEEVTPLLQAAQTARLNVVGVSFHIGSG 94

Query: 183 ATNSDTYRTAIASARAVFHVADKVGGARMRMLDIGGGFSVGTQFEETTNVIKIAIQTYFS 362
           AT S  Y+ AIASA++VF  A ++G  RM++L+IGGGF+ G+QF+E    IK A+QTYF 
Sbjct: 95  ATRSRAYKGAIASAKSVFEAAVRLGMPRMKILNIGGGFTAGSQFDEAATAIKSALQTYFP 154

Query: 363 DIPELEVIAEPG 398
           + P L VI+EPG
Sbjct: 155 NEPGLTVISEPG 166


>gb|AEQ02350.1| ornithine decarboxylase [Erythroxylum coca]
          Length = 413

 Score =  163 bits (412), Expect = 2e-38
 Identities = 80/132 (60%), Positives = 100/132 (75%)
 Frame = +3

Query: 3   KKHHPKCSLLLRLKAPDDSGARRRLGTKYGALPEEVEPLILAAKEAELKVIGVSFHVGSG 182
           +K HPKC+LLLR+KAP+D GAR  LG KYGALPEEV PL+ AA+ A L V+G SFH+GSG
Sbjct: 151 RKWHPKCALLLRVKAPEDGGARCPLGPKYGALPEEVIPLLQAAQAARLSVVGASFHIGSG 210

Query: 183 ATNSDTYRTAIASARAVFHVADKVGGARMRMLDIGGGFSVGTQFEETTNVIKIAIQTYFS 362
           AT+  +YR AIA A+ VF  A K+G  RM ML+IGGGF+ G+QF+E    IK A+QTYF 
Sbjct: 211 ATHFSSYRGAIAEAKKVFETAVKMGMPRMTMLNIGGGFTAGSQFDEAATAIKSALQTYFP 270

Query: 363 DIPELEVIAEPG 398
           + P L +I+EPG
Sbjct: 271 NEPGLTIISEPG 282


>ref|XP_002307756.1| predicted protein [Populus trichocarpa] gi|222857205|gb|EEE94752.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score =  160 bits (404), Expect = 1e-37
 Identities = 78/132 (59%), Positives = 101/132 (76%)
 Frame = +3

Query: 3   KKHHPKCSLLLRLKAPDDSGARRRLGTKYGALPEEVEPLILAAKEAELKVIGVSFHVGSG 182
           +K H KC+LL+R+KAPDDSGAR  LG KYGALP+EV PL+ AA+ A+L V+GVSFH+GSG
Sbjct: 153 RKWHSKCALLIRIKAPDDSGARCPLGPKYGALPDEVTPLLQAAQTAQLNVVGVSFHIGSG 212

Query: 183 ATNSDTYRTAIASARAVFHVADKVGGARMRMLDIGGGFSVGTQFEETTNVIKIAIQTYFS 362
           AT S  Y  AIASA++VF  A ++G   M++L+IGGGF+ G+QF+E    IK A+Q YF 
Sbjct: 213 ATRSRAYEGAIASAKSVFEAAVRLGMPGMKILNIGGGFTAGSQFDEAATTIKSALQAYFP 272

Query: 363 DIPELEVIAEPG 398
           + P L VI+EPG
Sbjct: 273 NEPGLTVISEPG 284


>ref|XP_002510611.1| ornithine decarboxylase, putative [Ricinus communis]
           gi|223551312|gb|EEF52798.1| ornithine decarboxylase,
           putative [Ricinus communis]
          Length = 416

 Score =  159 bits (401), Expect = 3e-37
 Identities = 76/131 (58%), Positives = 99/131 (75%)
 Frame = +3

Query: 6   KHHPKCSLLLRLKAPDDSGARRRLGTKYGALPEEVEPLILAAKEAELKVIGVSFHVGSGA 185
           K HPKCSLL+R+K PDDSGAR  LG+K+GALPEE+EPL+LAA+ A+L + GVSFH+GS +
Sbjct: 154 KCHPKCSLLIRIKPPDDSGARWPLGSKFGALPEEIEPLLLAAQAAKLTISGVSFHIGSES 213

Query: 186 TNSDTYRTAIASARAVFHVADKVGGARMRMLDIGGGFSVGTQFEETTNVIKIAIQTYFSD 365
            N   YR AI +A+ VF  A ++G   MR+L+IGGGF  G+ F+E   VIK A+Q YF D
Sbjct: 214 RNPHAYRGAIGAAKHVFDTASRLGMPPMRVLNIGGGFIAGSNFDEAATVIKAALQDYFGD 273

Query: 366 IPELEVIAEPG 398
            P +E+I+EPG
Sbjct: 274 NPGIEIISEPG 284


>gb|ABN04356.1| putative ornithine decarboxylase [Theobroma cacao]
          Length = 411

 Score =  158 bits (400), Expect = 4e-37
 Identities = 78/132 (59%), Positives = 96/132 (72%)
 Frame = +3

Query: 3   KKHHPKCSLLLRLKAPDDSGARRRLGTKYGALPEEVEPLILAAKEAELKVIGVSFHVGSG 182
           KK HPKC+LL+R+KAPDD GAR  LG KYGALPEEV PL+ AA+ A L V GVSFH+GSG
Sbjct: 151 KKWHPKCALLIRVKAPDDGGARCPLGPKYGALPEEVTPLLQAAQTARLTVTGVSFHIGSG 210

Query: 183 ATNSDTYRTAIASARAVFHVADKVGGARMRMLDIGGGFSVGTQFEETTNVIKIAIQTYFS 362
           A     YR AIA+A+ VF  A ++G  +M +L+IGGGF+ G QF E  + +K A+Q YF 
Sbjct: 211 AMQFRAYREAIAAAKTVFETAARLGMPKMHVLNIGGGFTAGPQFAEAASTVKAALQAYFP 270

Query: 363 DIPELEVIAEPG 398
           + P L VIAEPG
Sbjct: 271 NEPSLTVIAEPG 282


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