BLASTX nr result

ID: Dioscorea21_contig00038620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038620
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_115514.1| MP protein [Corchorus yellow vein virus - [Hoa ...   112   3e-23
gb|ACK57933.1| movement protein [Corchorus golden mosaic virus [...   110   2e-22
gb|ACJ73987.1| movement protein [Corchorus golden mosaic virus-[...   110   2e-22
ref|YP_001333690.1| MP protein [Corchorus golden mosaic virus] g...   110   2e-22
emb|CCH63334.1| MP [Sida golden mosaic Liguanea virus]                108   6e-22

>ref|YP_115514.1| MP protein [Corchorus yellow vein virus - [Hoa Binh]]
           gi|52145400|gb|AAU29409.1| MP protein [Corchorus yellow
           vein virus - [Hoa Binh]]
          Length = 292

 Score =  112 bits (280), Expect = 3e-23
 Identities = 53/107 (49%), Positives = 75/107 (70%), Gaps = 2/107 (1%)
 Frame = -1

Query: 323 HYYSASYFSVNDPIPWKAYFRVQDSNIRVGTYFTKMKGLLKLSAARKSNYVTFKGPTVRI 144
           HY+SAS+FS+ DPIPWK Y+RV D+N+  GT+F K KG LK+S A+ S  V F+ PTV+I
Sbjct: 102 HYFSASFFSLKDPIPWKLYYRVSDTNVHQGTHFAKFKGKLKMSTAKHSVDVIFRSPTVKI 161

Query: 143 NSPKYTLRDVDYKHVPYGSVCQAI--CRSNSSLSSFTPLCLLPGESY 9
            S ++T +D+D+ HV YG V + +  C S+S L   + + L PGES+
Sbjct: 162 LSKQFTGKDIDFSHVDYGKVERKLVKCESSSRLGLHSAIELRPGESW 208


>gb|ACK57933.1| movement protein [Corchorus golden mosaic virus
           [India:Bahraich:2008]] gi|242346776|gb|ACS92539.1|
           movement protein [Corchorus golden mosaic virus
           [India:Bahraich2:2008]]
          Length = 292

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/107 (49%), Positives = 75/107 (70%), Gaps = 2/107 (1%)
 Frame = -1

Query: 323 HYYSASYFSVNDPIPWKAYFRVQDSNIRVGTYFTKMKGLLKLSAARKSNYVTFKGPTVRI 144
           HY+SAS+FS+ DPIPWK Y+RV D+N+  GT+F K KG LK+S A+ S  V F+ PTV+I
Sbjct: 102 HYFSASFFSLKDPIPWKLYYRVSDTNVNQGTHFAKFKGKLKMSTAKHSVDVVFRSPTVKI 161

Query: 143 NSPKYTLRDVDYKHVPYGSVCQAICRSNSSLSS--FTPLCLLPGESY 9
            S ++T +D+D+ HV YG V + + +S SS  S   + + L PGES+
Sbjct: 162 LSKQFTGKDIDFSHVEYGKVERKLIKSASSSRSALHSAIELRPGESW 208


>gb|ACJ73987.1| movement protein [Corchorus golden mosaic
           virus-[India:Barrackpore:2008 ]]
           gi|225382119|gb|ACN89274.1| movement protein [Corchorus
           golden mosaic virus [India:Barrackpore2:2009]]
          Length = 292

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/107 (49%), Positives = 75/107 (70%), Gaps = 2/107 (1%)
 Frame = -1

Query: 323 HYYSASYFSVNDPIPWKAYFRVQDSNIRVGTYFTKMKGLLKLSAARKSNYVTFKGPTVRI 144
           HY+SAS+FS+ DPIPWK Y+RV D+N+  GT+F K KG LK+S A+ S  V F+ PTV+I
Sbjct: 102 HYFSASFFSLKDPIPWKLYYRVSDTNVNQGTHFAKFKGKLKMSTAKHSVDVVFRSPTVKI 161

Query: 143 NSPKYTLRDVDYKHVPYGSVCQAICRSNSSLSS--FTPLCLLPGESY 9
            S ++T +D+D+ HV YG V + + +S SS  S   + + L PGES+
Sbjct: 162 LSKQFTGKDIDFSHVEYGKVERKLIKSASSSRSALHSAIELRPGESW 208


>ref|YP_001333690.1| MP protein [Corchorus golden mosaic virus]
           gi|109140086|gb|ABG26114.1| MP protein [Corchorus golden
           mosaic virus]
          Length = 292

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/107 (49%), Positives = 75/107 (70%), Gaps = 2/107 (1%)
 Frame = -1

Query: 323 HYYSASYFSVNDPIPWKAYFRVQDSNIRVGTYFTKMKGLLKLSAARKSNYVTFKGPTVRI 144
           HY+SAS+FS+ DPIPWK Y+RV D+N+  GT+F K KG LK+S A+ S  V F+ PTV+I
Sbjct: 102 HYFSASFFSLKDPIPWKLYYRVSDTNVNQGTHFAKFKGKLKMSTAKHSVDVVFRSPTVKI 161

Query: 143 NSPKYTLRDVDYKHVPYGSVCQAICRSNSSLSS--FTPLCLLPGESY 9
            S ++T +D+D+ HV YG V + + +S SS  S   + + L PGES+
Sbjct: 162 LSKQFTGKDIDFSHVEYGKVERKLIKSASSSRSALHSAIELRPGESW 208


>emb|CCH63334.1| MP [Sida golden mosaic Liguanea virus]
          Length = 293

 Score =  108 bits (269), Expect = 6e-22
 Identities = 53/107 (49%), Positives = 72/107 (67%), Gaps = 2/107 (1%)
 Frame = -1

Query: 323 HYYSASYFSVNDPIPWKAYFRVQDSNIRVGTYFTKMKGLLKLSAARKSNYVTFKGPTVRI 144
           HY+SAS+FS+ DPIPWK Y+RV D+N+   T+F K KG LKLS A+ S  + F+ PTV+I
Sbjct: 102 HYFSASFFSLKDPIPWKLYYRVSDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKI 161

Query: 143 NSPKYTLRDVDYKHVPYGSVCQ--AICRSNSSLSSFTPLCLLPGESY 9
            S ++T +DVD+ HV YG   +    C S S L S  P+ + PGES+
Sbjct: 162 LSKQFTDKDVDFSHVDYGKWARKPIRCASMSRLGSRGPIEIRPGESW 208


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