BLASTX nr result
ID: Dioscorea21_contig00038595
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00038595 (420 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004170804.1| PREDICTED: pentatricopeptide repeat-containi... 103 1e-20 ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containi... 103 1e-20 ref|XP_003621264.1| Pentatricopeptide repeat-containing protein ... 103 1e-20 gb|ABK26521.1| unknown [Picea sitchensis] 103 2e-20 ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [S... 102 3e-20 >ref|XP_004170804.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15300-like, partial [Cucumis sativus] Length = 315 Score = 103 bits (258), Expect = 1e-20 Identities = 52/100 (52%), Positives = 71/100 (71%), Gaps = 1/100 (1%) Frame = -2 Query: 419 GRAGRLKESLEFIYSMDVRANAVVWRALLSACRVNLDVELAEVAVRNLLELGTHHCGDYV 240 GRAG L E+ +FI +M++ NA++WR LL ACRV+ DVEL A LL++ GDYV Sbjct: 198 GRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESGDYV 257 Query: 239 LLANIYASKGMWDDARRIRKLM-EGWIQKKPGFSLIELHN 123 LL+NIYAS+G WD +++RKLM +G ++KK G SLI+ N Sbjct: 258 LLSNIYASQGEWDGVQKVRKLMDDGGVKKKVGHSLIDSDN 297 >ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15300-like [Cucumis sativus] Length = 542 Score = 103 bits (258), Expect = 1e-20 Identities = 52/100 (52%), Positives = 71/100 (71%), Gaps = 1/100 (1%) Frame = -2 Query: 419 GRAGRLKESLEFIYSMDVRANAVVWRALLSACRVNLDVELAEVAVRNLLELGTHHCGDYV 240 GRAG L E+ +FI +M++ NA++WR LL ACRV+ DVEL A LL++ GDYV Sbjct: 425 GRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESGDYV 484 Query: 239 LLANIYASKGMWDDARRIRKLM-EGWIQKKPGFSLIELHN 123 LL+NIYAS+G WD +++RKLM +G ++KK G SLI+ N Sbjct: 485 LLSNIYASQGEWDGVQKVRKLMDDGGVKKKVGHSLIDSDN 524 >ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355496279|gb|AES77482.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 519 Score = 103 bits (257), Expect = 1e-20 Identities = 51/100 (51%), Positives = 70/100 (70%), Gaps = 1/100 (1%) Frame = -2 Query: 419 GRAGRLKESLEFIYSMDVRANAVVWRALLSACRVNLDVELAEVAVRNLLELGTHHCGDYV 240 GRAG LKE+ +FI SM + NA++WR LL+AC+V+ DVELA+VA L + H GDYV Sbjct: 420 GRAGLLKEAAKFIDSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYV 479 Query: 239 LLANIYASKGMWDDARRIRKLM-EGWIQKKPGFSLIELHN 123 L++N+YAS+G WD A ++RKLM + + K G S +E N Sbjct: 480 LMSNLYASRGEWDGAEKVRKLMDDSGVTKIRGSSFVEACN 519 >gb|ABK26521.1| unknown [Picea sitchensis] Length = 370 Score = 103 bits (256), Expect = 2e-20 Identities = 54/102 (52%), Positives = 73/102 (71%), Gaps = 1/102 (0%) Frame = -2 Query: 419 GRAGRLKESLEFIYSMDVRANAVVWRALLSACRVNLDVELAEVAVRNLLELGTHHCGDYV 240 GRAG L E+L FI M V NA VW +LL ACRV+ ++ELAE AV L+EL + G YV Sbjct: 146 GRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYV 205 Query: 239 LLANIYASKGMWDDARRIRKLM-EGWIQKKPGFSLIELHNQM 117 LL+NIYA+ G WDDA ++RK+M + ++K+PG S IE+ N++ Sbjct: 206 LLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWIEVQNKV 247 >ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor] gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor] Length = 693 Score = 102 bits (254), Expect = 3e-20 Identities = 51/98 (52%), Positives = 70/98 (71%), Gaps = 1/98 (1%) Frame = -2 Query: 419 GRAGRLKESLEFIYSMDVRANAVVWRALLSACRVNLDVELAEVAVRNLLELGTHHCGDYV 240 GRAG + E+ +FI +M + NAV+WRALLS+C V+ +VE+ E A++ ++ L H GDY+ Sbjct: 469 GRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYI 528 Query: 239 LLANIYASKGMWDDARRIRKLM-EGWIQKKPGFSLIEL 129 LL+NIYAS G W +A IRK M + I+K PG SLIEL Sbjct: 529 LLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIEL 566