BLASTX nr result

ID: Dioscorea21_contig00038595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038595
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170804.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20
ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20
ref|XP_003621264.1| Pentatricopeptide repeat-containing protein ...   103   1e-20
gb|ABK26521.1| unknown [Picea sitchensis]                             103   2e-20
ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [S...   102   3e-20

>ref|XP_004170804.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like, partial [Cucumis sativus]
          Length = 315

 Score =  103 bits (258), Expect = 1e-20
 Identities = 52/100 (52%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
 Frame = -2

Query: 419 GRAGRLKESLEFIYSMDVRANAVVWRALLSACRVNLDVELAEVAVRNLLELGTHHCGDYV 240
           GRAG L E+ +FI +M++  NA++WR LL ACRV+ DVEL   A   LL++     GDYV
Sbjct: 198 GRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESGDYV 257

Query: 239 LLANIYASKGMWDDARRIRKLM-EGWIQKKPGFSLIELHN 123
           LL+NIYAS+G WD  +++RKLM +G ++KK G SLI+  N
Sbjct: 258 LLSNIYASQGEWDGVQKVRKLMDDGGVKKKVGHSLIDSDN 297


>ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Cucumis sativus]
          Length = 542

 Score =  103 bits (258), Expect = 1e-20
 Identities = 52/100 (52%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
 Frame = -2

Query: 419 GRAGRLKESLEFIYSMDVRANAVVWRALLSACRVNLDVELAEVAVRNLLELGTHHCGDYV 240
           GRAG L E+ +FI +M++  NA++WR LL ACRV+ DVEL   A   LL++     GDYV
Sbjct: 425 GRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESGDYV 484

Query: 239 LLANIYASKGMWDDARRIRKLM-EGWIQKKPGFSLIELHN 123
           LL+NIYAS+G WD  +++RKLM +G ++KK G SLI+  N
Sbjct: 485 LLSNIYASQGEWDGVQKVRKLMDDGGVKKKVGHSLIDSDN 524


>ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355496279|gb|AES77482.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 519

 Score =  103 bits (257), Expect = 1e-20
 Identities = 51/100 (51%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
 Frame = -2

Query: 419 GRAGRLKESLEFIYSMDVRANAVVWRALLSACRVNLDVELAEVAVRNLLELGTHHCGDYV 240
           GRAG LKE+ +FI SM +  NA++WR LL+AC+V+ DVELA+VA   L  +   H GDYV
Sbjct: 420 GRAGLLKEAAKFIDSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYV 479

Query: 239 LLANIYASKGMWDDARRIRKLM-EGWIQKKPGFSLIELHN 123
           L++N+YAS+G WD A ++RKLM +  + K  G S +E  N
Sbjct: 480 LMSNLYASRGEWDGAEKVRKLMDDSGVTKIRGSSFVEACN 519


>gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  103 bits (256), Expect = 2e-20
 Identities = 54/102 (52%), Positives = 73/102 (71%), Gaps = 1/102 (0%)
 Frame = -2

Query: 419 GRAGRLKESLEFIYSMDVRANAVVWRALLSACRVNLDVELAEVAVRNLLELGTHHCGDYV 240
           GRAG L E+L FI  M V  NA VW +LL ACRV+ ++ELAE AV  L+EL   + G YV
Sbjct: 146 GRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYV 205

Query: 239 LLANIYASKGMWDDARRIRKLM-EGWIQKKPGFSLIELHNQM 117
           LL+NIYA+ G WDDA ++RK+M +  ++K+PG S IE+ N++
Sbjct: 206 LLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWIEVQNKV 247


>ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
           gi|241939236|gb|EES12381.1| hypothetical protein
           SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/98 (52%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
 Frame = -2

Query: 419 GRAGRLKESLEFIYSMDVRANAVVWRALLSACRVNLDVELAEVAVRNLLELGTHHCGDYV 240
           GRAG + E+ +FI +M +  NAV+WRALLS+C V+ +VE+ E A++ ++ L   H GDY+
Sbjct: 469 GRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYI 528

Query: 239 LLANIYASKGMWDDARRIRKLM-EGWIQKKPGFSLIEL 129
           LL+NIYAS G W +A  IRK M +  I+K PG SLIEL
Sbjct: 529 LLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIEL 566


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