BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038593
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW62799.1| putative pentatricopeptide repeat family protein ...   160   8e-38
ref|XP_003629742.1| Pentatricopeptide repeat-containing protein ...   159   2e-37
gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]        158   5e-37
ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containi...   158   5e-37
ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containi...   157   8e-37

>gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  160 bits (406), Expect = 8e-38
 Identities = 69/142 (48%), Positives = 103/142 (72%)
 Frame = -2

Query: 428  IEPNHVTFISLLSACSYIGEVKKGQCFFDEMVNTHGISPTKEHYACMVDLLGRAGLLSEA 249
            + PNH+T  S+LSAC++ G V   + +F+ M  T GI  T+EHYACM+D+LGRAG L +A
Sbjct: 607  VAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDA 666

Query: 248  EAIIRKMPIEPDAAVWGALIGACKMHENPTIGRRAANQIFTLEPDNSAAHIALAKTFAAA 69
              ++  MP + +AAVWGAL+GA ++H +P +GR AA ++FTLEP+ S  H+ LA T+A+A
Sbjct: 667  MELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASA 726

Query: 68   RMWDDVAEMRTIFKEKKLLKEP 3
             MWD++A++R + K+  + KEP
Sbjct: 727  GMWDEMAKVRKLMKDSNVKKEP 748


>ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355523764|gb|AET04218.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 616

 Score =  159 bits (402), Expect = 2e-37
 Identities = 71/142 (50%), Positives = 100/142 (70%)
 Frame = -2

Query: 428 IEPNHVTFISLLSACSYIGEVKKGQCFFDEMVNTHGISPTKEHYACMVDLLGRAGLLSEA 249
           I+PNHVTF+ L +ACS+ G V++GQ  F  M   +G+SPT +HYACM DLLGRAG L +A
Sbjct: 340 IKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPTADHYACMADLLGRAGHLEKA 399

Query: 248 EAIIRKMPIEPDAAVWGALIGACKMHENPTIGRRAANQIFTLEPDNSAAHIALAKTFAAA 69
             +++ MP+EP+  VWGAL+GA  +H NP +   A+  +F LEPDN   ++ L+KT+A A
Sbjct: 400 LQLVQTMPMEPNGGVWGALLGASHIHGNPDVAEIASRSLFELEPDNLGNYLLLSKTYALA 459

Query: 68  RMWDDVAEMRTIFKEKKLLKEP 3
             WDDV+ +R + +EK+L K P
Sbjct: 460 AKWDDVSRVRKLMREKQLRKNP 481


>gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  158 bits (399), Expect = 5e-37
 Identities = 71/140 (50%), Positives = 102/140 (72%)
 Frame = -2

Query: 422  PNHVTFISLLSACSYIGEVKKGQCFFDEMVNTHGISPTKEHYACMVDLLGRAGLLSEAEA 243
            PN VTF+ LL ACS+ G V +G  FF  M + +G++P  EHYACMVDLLGRAG +  AE 
Sbjct: 648  PNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEH 707

Query: 242  IIRKMPIEPDAAVWGALIGACKMHENPTIGRRAANQIFTLEPDNSAAHIALAKTFAAARM 63
             I  MPIEPD+ +W AL+GACK+H+N  IGRRAA ++F++EP N+  ++ L+  +++  M
Sbjct: 708  FIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGM 767

Query: 62   WDDVAEMRTIFKEKKLLKEP 3
            WD+VA++R + KE+ + K+P
Sbjct: 768  WDEVAKVRKLMKERGVNKDP 787


>ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  158 bits (399), Expect = 5e-37
 Identities = 70/142 (49%), Positives = 101/142 (71%)
 Frame = -2

Query: 428  IEPNHVTFISLLSACSYIGEVKKGQCFFDEMVNTHGISPTKEHYACMVDLLGRAGLLSEA 249
            I PNH+T  S+L AC++ G V + + +F+ M    GI  T+EHYACM+DLLGRAG L +A
Sbjct: 602  ISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDA 661

Query: 248  EAIIRKMPIEPDAAVWGALIGACKMHENPTIGRRAANQIFTLEPDNSAAHIALAKTFAAA 69
              ++  MP + +AAVWGAL+ A ++H +P +GR AA ++F LEP+ S  H+ LA T+A+A
Sbjct: 662  MELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASA 721

Query: 68   RMWDDVAEMRTIFKEKKLLKEP 3
             MWDDVA++R + K+ K+ KEP
Sbjct: 722  GMWDDVAKVRKLMKDSKVKKEP 743


>ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 933

 Score =  157 bits (397), Expect = 8e-37
 Identities = 66/142 (46%), Positives = 102/142 (71%)
 Frame = -2

Query: 428  IEPNHVTFISLLSACSYIGEVKKGQCFFDEMVNTHGISPTKEHYACMVDLLGRAGLLSEA 249
            + PNH+T +S+L AC++ G V + + +F+ M    G  P +EHYACM+DLLGRAG ++EA
Sbjct: 658  VSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEA 717

Query: 248  EAIIRKMPIEPDAAVWGALIGACKMHENPTIGRRAANQIFTLEPDNSAAHIALAKTFAAA 69
              ++ KMP E +A+VWGAL+GA ++H++  +GRRAA  +F LEP+ S  H+ LA  +A+A
Sbjct: 718  VELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASA 777

Query: 68   RMWDDVAEMRTIFKEKKLLKEP 3
              W++VAE+R + ++ K+ KEP
Sbjct: 778  GKWENVAEVRRLMRDSKVKKEP 799