BLASTX nr result

ID: Dioscorea21_contig00038592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038592
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002464972.1| hypothetical protein SORBIDRAFT_01g029730 [S...   115   5e-24
ref|XP_002511862.1| Rop guanine nucleotide exchange factor, puta...   113   1e-23
ref|XP_002320133.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23
ref|NP_001130570.1| uncharacterized protein LOC100191669 [Zea ma...   112   4e-23
ref|XP_003521141.1| PREDICTED: rop guanine nucleotide exchange f...   110   2e-22

>ref|XP_002464972.1| hypothetical protein SORBIDRAFT_01g029730 [Sorghum bicolor]
           gi|241918826|gb|EER91970.1| hypothetical protein
           SORBIDRAFT_01g029730 [Sorghum bicolor]
          Length = 489

 Score =  115 bits (287), Expect = 5e-24
 Identities = 48/78 (61%), Positives = 66/78 (84%)
 Frame = -1

Query: 254 SANGDISKSCRKVIHRNEEKWWLPIPCVPAVGLPEKTRKDLQQKKDCANQIHKAAMAINN 75
           S++  +S S R+  HRNE+KWWLP+PCVP  GL +K RKDLQ+++DCANQIHKAA+AIN+
Sbjct: 255 SSSRTMSSSFRRSAHRNEDKWWLPVPCVPDAGLTDKARKDLQKRRDCANQIHKAAVAINS 314

Query: 74  SILTEMEIPETYMATLPK 21
            +L++ME+PE++MA LPK
Sbjct: 315 GVLSDMEVPESFMAVLPK 332


>ref|XP_002511862.1| Rop guanine nucleotide exchange factor, putative [Ricinus communis]
           gi|223549042|gb|EEF50531.1| Rop guanine nucleotide
           exchange factor, putative [Ricinus communis]
          Length = 471

 Score =  113 bits (283), Expect = 1e-23
 Identities = 53/84 (63%), Positives = 69/84 (82%), Gaps = 1/84 (1%)
 Frame = -1

Query: 269 DEENVSANGDISKSCRKVI-HRNEEKWWLPIPCVPAVGLPEKTRKDLQQKKDCANQIHKA 93
           ++ ++S+N   S S R+VI  R EEKWW+P+PCVP  G+ EK+RK L+ K+DCANQIHKA
Sbjct: 233 EQGSMSSNSTRSGSFRRVIVQRKEEKWWVPVPCVPPGGISEKSRKHLRHKRDCANQIHKA 292

Query: 92  AMAINNSILTEMEIPETYMATLPK 21
           AMAIN+SIL EM+IP+TYMA+LPK
Sbjct: 293 AMAINSSILAEMDIPDTYMASLPK 316


>ref|XP_002320133.1| predicted protein [Populus trichocarpa] gi|222860906|gb|EEE98448.1|
           predicted protein [Populus trichocarpa]
          Length = 473

 Score =  113 bits (283), Expect = 1e-23
 Identities = 53/84 (63%), Positives = 70/84 (83%), Gaps = 1/84 (1%)
 Frame = -1

Query: 269 DEENVSANGDISKSCRKVI-HRNEEKWWLPIPCVPAVGLPEKTRKDLQQKKDCANQIHKA 93
           ++ ++S+N  +S S R+VI  R EEKWW+P+PCVP+ GL EK+RK L+ K+DCA QIHKA
Sbjct: 241 EQGSMSSNSTLSGSFRRVIVQRKEEKWWVPVPCVPSGGLSEKSRKHLRHKRDCAYQIHKA 300

Query: 92  AMAINNSILTEMEIPETYMATLPK 21
           +MAIN+SIL EMEIPETY+A+LPK
Sbjct: 301 SMAINSSILAEMEIPETYIASLPK 324


>ref|NP_001130570.1| uncharacterized protein LOC100191669 [Zea mays]
           gi|194689514|gb|ACF78841.1| unknown [Zea mays]
           gi|195611980|gb|ACG27820.1| pollen-specific kinase
           partner protein [Zea mays] gi|414867651|tpg|DAA46208.1|
           TPA: pollen-specific kinase partner protein [Zea mays]
          Length = 489

 Score =  112 bits (279), Expect = 4e-23
 Identities = 47/78 (60%), Positives = 63/78 (80%)
 Frame = -1

Query: 254 SANGDISKSCRKVIHRNEEKWWLPIPCVPAVGLPEKTRKDLQQKKDCANQIHKAAMAINN 75
           S+    S S R+  HRN++KWWLP+PCVP  GL +K RKDLQQ++DCANQIHKAA++IN+
Sbjct: 255 SSRMSCSSSFRRSAHRNDDKWWLPVPCVPDAGLTDKARKDLQQRRDCANQIHKAAVSINS 314

Query: 74  SILTEMEIPETYMATLPK 21
            +L +ME+PE++MA LPK
Sbjct: 315 GVLGDMEVPESFMAVLPK 332


>ref|XP_003521141.1| PREDICTED: rop guanine nucleotide exchange factor 2-like [Glycine
           max]
          Length = 481

 Score =  110 bits (274), Expect = 2e-22
 Identities = 49/85 (57%), Positives = 67/85 (78%), Gaps = 2/85 (2%)
 Frame = -1

Query: 269 DEENVSANGDISK--SCRKVIHRNEEKWWLPIPCVPAVGLPEKTRKDLQQKKDCANQIHK 96
           ++ ++S N   S+  S R+++ R +EKWWLP+PCV   GL +K+RK L +K+DCANQIHK
Sbjct: 242 EQGSISGNSTRSRGGSFRRIVQRKDEKWWLPVPCVHPGGLSDKSRKHLNEKRDCANQIHK 301

Query: 95  AAMAINNSILTEMEIPETYMATLPK 21
           AAMAIN+S+L EM+IPETYM+ LPK
Sbjct: 302 AAMAINSSVLAEMDIPETYMSNLPK 326


Top