BLASTX nr result

ID: Dioscorea21_contig00038574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038574
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309575.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indi...    88   8e-16
emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]                88   8e-16
ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group] g...    88   8e-16
ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat...    87   2e-15

>ref|XP_002309575.1| predicted protein [Populus trichocarpa] gi|222855551|gb|EEE93098.1|
           predicted protein [Populus trichocarpa]
          Length = 653

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 41/75 (54%), Positives = 58/75 (77%)
 Frame = +2

Query: 2   EYTLSTTLKACGLVGPAGHGAGIQVHGVCIKSGFELHDVVGNSVIFMYSRSGMVDEGERM 181
           ++T ST LKACGL+   G   G Q+H +C+K+GF++ +VVGNS+I MYS+ G ++E   M
Sbjct: 73  DFTFSTNLKACGLLN--GLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACM 130

Query: 182 FEIMPVRSLVSWNAM 226
           FE+MPVR+L+SWNAM
Sbjct: 131 FEVMPVRNLISWNAM 145


>gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
          Length = 690

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 38/75 (50%), Positives = 55/75 (73%)
 Frame = +2

Query: 2   EYTLSTTLKACGLVGPAGHGAGIQVHGVCIKSGFELHDVVGNSVIFMYSRSGMVDEGERM 181
           E+TLS TLKACG     G  AG+Q+HGVC+++GFE HDVV NS++ MYS+     +  R+
Sbjct: 105 EFTLSATLKACG----GGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRV 160

Query: 182 FEIMPVRSLVSWNAM 226
           F+++P R+L +WN+M
Sbjct: 161 FDVIPSRNLATWNSM 175


>emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
          Length = 886

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 38/75 (50%), Positives = 55/75 (73%)
 Frame = +2

Query: 2   EYTLSTTLKACGLVGPAGHGAGIQVHGVCIKSGFELHDVVGNSVIFMYSRSGMVDEGERM 181
           E+TLS TLKACG     G  AG+Q+HGVC+++GFE HDVV NS++ MYS+     +  R+
Sbjct: 301 EFTLSATLKACG----GGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRV 356

Query: 182 FEIMPVRSLVSWNAM 226
           F+++P R+L +WN+M
Sbjct: 357 FDVIPSRNLATWNSM 371


>ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
           gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza
           sativa Japonica Group] gi|113565898|dbj|BAF16241.1|
           Os04g0686500 [Oryza sativa Japonica Group]
           gi|215766744|dbj|BAG98972.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222629815|gb|EEE61947.1| hypothetical protein
           OsJ_16704 [Oryza sativa Japonica Group]
          Length = 690

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 38/75 (50%), Positives = 55/75 (73%)
 Frame = +2

Query: 2   EYTLSTTLKACGLVGPAGHGAGIQVHGVCIKSGFELHDVVGNSVIFMYSRSGMVDEGERM 181
           E+TLS TLKACG     G  AG+Q+HGVC+++GFE HDVV NS++ MYS+     +  R+
Sbjct: 105 EFTLSATLKACG----GGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRV 160

Query: 182 FEIMPVRSLVSWNAM 226
           F+++P R+L +WN+M
Sbjct: 161 FDVIPSRNLATWNSM 175


>ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera] gi|296083673|emb|CBI23662.3|
           unnamed protein product [Vitis vinifera]
          Length = 685

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/75 (54%), Positives = 55/75 (73%)
 Frame = +2

Query: 2   EYTLSTTLKACGLVGPAGHGAGIQVHGVCIKSGFELHDVVGNSVIFMYSRSGMVDEGERM 181
           E+T ST+LKACG +G   +G  +Q+HG+C+KSGFE   VVGN+ I MYS+ G +   E++
Sbjct: 105 EFTFSTSLKACGALGVVENG--MQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQV 162

Query: 182 FEIMPVRSLVSWNAM 226
           F  MP R+LVSWNAM
Sbjct: 163 FNKMPFRNLVSWNAM 177


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