BLASTX nr result

ID: Dioscorea21_contig00038525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038525
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD31142.1| ATP-dependent RNA helicase-like protein [Oryza s...    72   6e-11
gb|EEE67555.1| hypothetical protein OsJ_25054 [Oryza sativa Japo...    72   6e-11
gb|EEC82416.1| hypothetical protein OsI_26803 [Oryza sativa Indi...    72   6e-11
ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP...    66   3e-09
ref|XP_003559979.1| PREDICTED: putative ATP-dependent helicase H...    66   3e-09

>dbj|BAD31142.1| ATP-dependent RNA helicase-like protein [Oryza sativa Japonica
           Group] gi|50509849|dbj|BAD32021.1| ATP-dependent RNA
           helicase-like protein [Oryza sativa Japonica Group]
          Length = 548

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 29/124 (23%)
 Frame = +3

Query: 3   NFHLFFKGFKLRLESRIDSVSIDNGEFLVLVPFAKKTQVVSP----------RNDHPEEI 152
           +FHLF KG KLR+E+ I ++++  GEF+VLVPFA+K+Q  SP           +    ++
Sbjct: 47  SFHLFLKGTKLRVEAEIGTLAVGEGEFIVLVPFARKSQQCSPVAMAEQGQITESPRSSQV 106

Query: 153 NTQSAATEQGMMHEAS-------------------HSAWKEIMNDLSSISEILPDDSILT 275
           +T + +  +G+    S                   +SAW+EIM+DLSSIS    DDS   
Sbjct: 107 STGANSARRGITDNLSSIPSSPHAETASRYFSSGANSAWQEIMDDLSSISSSPQDDSASK 166

Query: 276 SFGA 287
           +F A
Sbjct: 167 NFCA 170


>gb|EEE67555.1| hypothetical protein OsJ_25054 [Oryza sativa Japonica Group]
          Length = 1015

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 29/124 (23%)
 Frame = +3

Query: 3   NFHLFFKGFKLRLESRIDSVSIDNGEFLVLVPFAKKTQVVSP----------RNDHPEEI 152
           +FHLF KG KLR+E+ I ++++  GEF+VLVPFA+K+Q  SP           +    ++
Sbjct: 47  SFHLFLKGTKLRVEAEIGTLAVGEGEFIVLVPFARKSQQCSPVAMAEQGQITESPRSSQV 106

Query: 153 NTQSAATEQGMMHEAS-------------------HSAWKEIMNDLSSISEILPDDSILT 275
           +T + +  +G+    S                   +SAW+EIM+DLSSIS    DDS   
Sbjct: 107 STGANSARRGITDNLSSIPSSPHAETASRYFSSGANSAWQEIMDDLSSISSSPQDDSASK 166

Query: 276 SFGA 287
           +F A
Sbjct: 167 NFCA 170


>gb|EEC82416.1| hypothetical protein OsI_26803 [Oryza sativa Indica Group]
          Length = 1049

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 29/124 (23%)
 Frame = +3

Query: 3   NFHLFFKGFKLRLESRIDSVSIDNGEFLVLVPFAKKTQVVSP----------RNDHPEEI 152
           +FHLF KG KLR+E+ I ++++  GEF+VLVPFA+K+Q  SP           +    ++
Sbjct: 47  SFHLFLKGTKLRVEAEIGTLAVGEGEFIVLVPFARKSQQCSPVAMAEQGQITESPRSSQV 106

Query: 153 NTQSAATEQGMMHEAS-------------------HSAWKEIMNDLSSISEILPDDSILT 275
           +T + +  +G+    S                   +SAW+EIM+DLSSIS    DDS   
Sbjct: 107 STGANSARRGITDNLSSIPSSPHAETASRYFSSGANSAWQEIMDDLSSISSSPQDDSASK 166

Query: 276 SFGA 287
           +F A
Sbjct: 167 NFCA 170


>ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
           HRQ1-like [Cucumis sativus]
          Length = 1218

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/78 (44%), Positives = 50/78 (64%)
 Frame = +3

Query: 3   NFHLFFKGFKLRLESRIDSVSIDNGEFLVLVPFAKKTQVVSPRNDHPEEINTQSAATEQG 182
           NFHLFFKG KL+ +S+I +  ID+GEFLVL+PF KK    S   D  E  ++ S+ T   
Sbjct: 47  NFHLFFKGTKLKAQSQISACCIDHGEFLVLIPFNKKESSKSRLRDQYELESSVSSGTS-- 104

Query: 183 MMHEASHSAWKEIMNDLS 236
            + + + SAW +++ DLS
Sbjct: 105 -ISQFADSAWSDMVQDLS 121


>ref|XP_003559979.1| PREDICTED: putative ATP-dependent helicase HRQ1-like [Brachypodium
           distachyon]
          Length = 1015

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/80 (45%), Positives = 52/80 (65%)
 Frame = +3

Query: 3   NFHLFFKGFKLRLESRIDSVSIDNGEFLVLVPFAKKTQVVSPRNDHPEEINTQSAATEQG 182
           NFHLF KG KLRL++ I S+   +GE +VLVPFA+K+   SP     +E +     + + 
Sbjct: 47  NFHLFLKGAKLRLDAEIGSLVAGHGELIVLVPFARKSVQYSPVAVPGQEQSANPPISSE- 105

Query: 183 MMHEASHSAWKEIMNDLSSI 242
            +   ++SAWK+IM+DLSSI
Sbjct: 106 -VAAGANSAWKDIMDDLSSI 124


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