BLASTX nr result

ID: Dioscorea21_contig00038523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038523
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27646.3| unnamed protein product [Vitis vinifera]              220   8e-56
ref|XP_002271815.1| PREDICTED: ELMO domain-containing protein A-...   220   8e-56
gb|ACF81077.1| unknown [Zea mays] gi|413920846|gb|AFW60778.1| hy...   213   1e-53
gb|ABA93689.2| phagocytosis and cell motility protein ELMO1, put...   206   2e-51
ref|XP_002514926.1| ELMO domain-containing protein, putative [Ri...   201   5e-50

>emb|CBI27646.3| unnamed protein product [Vitis vinifera]
          Length = 269

 Score =  220 bits (561), Expect = 8e-56
 Identities = 106/140 (75%), Positives = 118/140 (84%), Gaps = 1/140 (0%)
 Frame = +3

Query: 63  SHGYCVAIRTMPPCSISRCSHALVPS-DDSTSGSPRWLGRSLSCVCIKRKGAYERIGNNL 239
           + G CVAIRT+ P S+SRC HA   S DD T G+P W+GR L+CVC KRKG YERI  NL
Sbjct: 6   TQGSCVAIRTLSPSSVSRCPHASASSSDDVTCGTPTWIGRGLTCVCFKRKGTYERICINL 65

Query: 240 TPIQVERLQRLKHRMEVYFDASRHEHQEALRALWSATYPDQELIGLISDQWKQMGWQGRD 419
           TP Q ERL+RL+HRM+VYFDASR +HQEALRALWSATYP QEL GLIS+QWK+MGWQGRD
Sbjct: 66  TPHQEERLRRLRHRMKVYFDASRPDHQEALRALWSATYPGQELHGLISEQWKEMGWQGRD 125

Query: 420 PSTDFRGAGFISLENLLFFA 479
           PSTDFRGAGFISLENLLFFA
Sbjct: 126 PSTDFRGAGFISLENLLFFA 145


>ref|XP_002271815.1| PREDICTED: ELMO domain-containing protein A-like [Vitis vinifera]
          Length = 301

 Score =  220 bits (561), Expect = 8e-56
 Identities = 106/140 (75%), Positives = 118/140 (84%), Gaps = 1/140 (0%)
 Frame = +3

Query: 63  SHGYCVAIRTMPPCSISRCSHALVPS-DDSTSGSPRWLGRSLSCVCIKRKGAYERIGNNL 239
           + G CVAIRT+ P S+SRC HA   S DD T G+P W+GR L+CVC KRKG YERI  NL
Sbjct: 38  TQGSCVAIRTLSPSSVSRCPHASASSSDDVTCGTPTWIGRGLTCVCFKRKGTYERICINL 97

Query: 240 TPIQVERLQRLKHRMEVYFDASRHEHQEALRALWSATYPDQELIGLISDQWKQMGWQGRD 419
           TP Q ERL+RL+HRM+VYFDASR +HQEALRALWSATYP QEL GLIS+QWK+MGWQGRD
Sbjct: 98  TPHQEERLRRLRHRMKVYFDASRPDHQEALRALWSATYPGQELHGLISEQWKEMGWQGRD 157

Query: 420 PSTDFRGAGFISLENLLFFA 479
           PSTDFRGAGFISLENLLFFA
Sbjct: 158 PSTDFRGAGFISLENLLFFA 177


>gb|ACF81077.1| unknown [Zea mays] gi|413920846|gb|AFW60778.1| hypothetical protein
           ZEAMMB73_514808 [Zea mays]
          Length = 287

 Score =  213 bits (543), Expect = 1e-53
 Identities = 103/141 (73%), Positives = 118/141 (83%), Gaps = 3/141 (2%)
 Frame = +3

Query: 66  HGYCVAIRT-MPPCSISRCSHALVP--SDDSTSGSPRWLGRSLSCVCIKRKGAYERIGNN 236
           H  C+A+RT +P C+I     + +P  SD+++ GSPRW+GR LSCVCIKRKG YERI  N
Sbjct: 23  HHGCLAVRTSLPRCAIGAGGGSSLPGSSDETSCGSPRWIGRGLSCVCIKRKGTYERICMN 82

Query: 237 LTPIQVERLQRLKHRMEVYFDASRHEHQEALRALWSATYPDQELIGLISDQWKQMGWQGR 416
           LTP+Q ERLQRLKHRM+VYFD SR +HQEAL+ALW ATYPDQEL GLIS+QWK MGWQGR
Sbjct: 83  LTPVQEERLQRLKHRMKVYFDPSRRDHQEALKALWHATYPDQELEGLISEQWKDMGWQGR 142

Query: 417 DPSTDFRGAGFISLENLLFFA 479
           DPSTDFRGAGFISLENLLFFA
Sbjct: 143 DPSTDFRGAGFISLENLLFFA 163


>gb|ABA93689.2| phagocytosis and cell motility protein ELMO1, putative, expressed
           [Oryza sativa Japonica Group]
           gi|218185744|gb|EEC68171.1| hypothetical protein
           OsI_36117 [Oryza sativa Indica Group]
           gi|222615973|gb|EEE52105.1| hypothetical protein
           OsJ_33903 [Oryza sativa Japonica Group]
          Length = 285

 Score =  206 bits (523), Expect = 2e-51
 Identities = 102/144 (70%), Positives = 117/144 (81%), Gaps = 6/144 (4%)
 Frame = +3

Query: 66  HGYCVAIRT-MPPCSISRCSHALVP-----SDDSTSGSPRWLGRSLSCVCIKRKGAYERI 227
           HG C+A+R  +P CS+              SD+++ GSPRW+G+SLSCVCIKRKGAYERI
Sbjct: 19  HG-CLAVRAPVPRCSLGGGGGGGAAAMGGSSDEASCGSPRWIGKSLSCVCIKRKGAYERI 77

Query: 228 GNNLTPIQVERLQRLKHRMEVYFDASRHEHQEALRALWSATYPDQELIGLISDQWKQMGW 407
             NLTP+Q ERLQRL+HRM+VYFD SR +HQEAL+ALW ATYPDQEL GLIS+QWK MGW
Sbjct: 78  CMNLTPVQEERLQRLRHRMKVYFDPSRRDHQEALKALWHATYPDQELQGLISEQWKDMGW 137

Query: 408 QGRDPSTDFRGAGFISLENLLFFA 479
           QGRDPSTDFRGAGFISLENLLFFA
Sbjct: 138 QGRDPSTDFRGAGFISLENLLFFA 161


>ref|XP_002514926.1| ELMO domain-containing protein, putative [Ricinus communis]
           gi|223545977|gb|EEF47480.1| ELMO domain-containing
           protein, putative [Ricinus communis]
          Length = 259

 Score =  201 bits (511), Expect = 5e-50
 Identities = 96/126 (76%), Positives = 109/126 (86%)
 Frame = +3

Query: 102 CSISRCSHALVPSDDSTSGSPRWLGRSLSCVCIKRKGAYERIGNNLTPIQVERLQRLKHR 281
           CS S   + L  SDD+T G+P W+G+ L+CVC KRKGAYERI  NLTP Q ERL+RL+HR
Sbjct: 11  CSKSAVGNRL-SSDDATCGTPTWIGKGLTCVCFKRKGAYERICINLTPHQEERLKRLRHR 69

Query: 282 MEVYFDASRHEHQEALRALWSATYPDQELIGLISDQWKQMGWQGRDPSTDFRGAGFISLE 461
           M++YFDASR +HQEALRALWSATYPDQ+L GLISDQWK+MGWQGRDPSTDFRGAGFISLE
Sbjct: 70  MKIYFDASRPDHQEALRALWSATYPDQQLRGLISDQWKEMGWQGRDPSTDFRGAGFISLE 129

Query: 462 NLLFFA 479
           NLLFFA
Sbjct: 130 NLLFFA 135


Top