BLASTX nr result

ID: Dioscorea21_contig00038516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038516
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   177   1e-42
gb|ABW74566.1| integrase [Boechera divaricarpa]                       174   9e-42
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   172   3e-41
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]   170   1e-40
emb|CAB75932.1| putative protein [Arabidopsis thaliana]               161   4e-38

>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  177 bits (448), Expect = 1e-42
 Identities = 81/140 (57%), Positives = 103/140 (73%)
 Frame = +3

Query: 3    YLTHSRPDLMFPVCLLSRFMACPTKIQFAAARNVLRYIAGTLDFGIQYYRSSNFALQGFT 182
            YLTH+RPD+ FPV ++SRFM CP+K    AA+ +LRYI GT DFGI Y     F L G+T
Sbjct: 1046 YLTHTRPDIAFPVEVISRFMHCPSKQHLGAAKRLLRYIVGTYDFGIWYGHVQEFKLVGYT 1105

Query: 183  DSDWCGDLTDRRSTSGFVFNLGSGAICWASKKQDVVALSSTEAEYIALCGACCHGVWMKK 362
            DSDW G L DR+STSG++F+LGSGA+CW+SKKQ V ALSS+EAEY A   + C  VW+++
Sbjct: 1106 DSDWAGCLEDRKSTSGYMFSLGSGAVCWSSKKQAVTALSSSEAEYTAATSSACQAVWLRR 1165

Query: 363  MLADFGVQSEEAIPIWCDNK 422
            +LAD   + EE   I+CDNK
Sbjct: 1166 ILADINQEHEEPTVIYCDNK 1185


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  174 bits (440), Expect = 9e-42
 Identities = 82/140 (58%), Positives = 103/140 (73%)
 Frame = +3

Query: 3    YLTHSRPDLMFPVCLLSRFMACPTKIQFAAARNVLRYIAGTLDFGIQYYRSSNFALQGFT 182
            YLTH+RPD+ F V  +SRFM  PTK  F AA+ +LRYIA T ++G+ Y   S F L GFT
Sbjct: 948  YLTHTRPDICFAVSAISRFMHGPTKQHFGAAKRLLRYIARTAEYGLWYCSVSKFKLVGFT 1007

Query: 183  DSDWCGDLTDRRSTSGFVFNLGSGAICWASKKQDVVALSSTEAEYIALCGACCHGVWMKK 362
            DSDW G + DR+STSG VFNLGSGA+CW+SKKQ+V ALSS+EAEY A   A C  VW+++
Sbjct: 1008 DSDWAGCVQDRKSTSGHVFNLGSGAVCWSSKKQNVTALSSSEAEYTAATAAACQAVWLRR 1067

Query: 363  MLADFGVQSEEAIPIWCDNK 422
            +LAD   + E+A  I+CDNK
Sbjct: 1068 ILADIKQEQEKATTIFCDNK 1087


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  172 bits (436), Expect = 3e-41
 Identities = 80/140 (57%), Positives = 101/140 (72%)
 Frame = +3

Query: 3    YLTHSRPDLMFPVCLLSRFMACPTKIQFAAARNVLRYIAGTLDFGIQYYRSSNFALQGFT 182
            YLTH+RPD+ F V ++SRFM CP+K    AA+ +LRYIAGT DFGI Y     F L G+T
Sbjct: 1057 YLTHTRPDIAFAVGVISRFMHCPSKQHLGAAKRLLRYIAGTYDFGIWYGHVQEFKLVGYT 1116

Query: 183  DSDWCGDLTDRRSTSGFVFNLGSGAICWASKKQDVVALSSTEAEYIALCGACCHGVWMKK 362
            DSDW G L DR+S SG++F+LGSGA+CW+SKKQ V ALSS EAEY A   + C  VW+++
Sbjct: 1117 DSDWAGCLEDRKSXSGYMFSLGSGAVCWSSKKQAVTALSSXEAEYTAATSSXCQAVWLRR 1176

Query: 363  MLADFGVQSEEAIPIWCDNK 422
            +LAD   + EE   I+CDNK
Sbjct: 1177 ILADINQEHEEPTVIYCDNK 1196


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score =  170 bits (430), Expect = 1e-40
 Identities = 79/140 (56%), Positives = 100/140 (71%)
 Frame = +3

Query: 3    YLTHSRPDLMFPVCLLSRFMACPTKIQFAAARNVLRYIAGTLDFGIQYYRSSNFALQGFT 182
            YLTH+RPD  F V ++SRFM CP+K    AA+ +LRYIAGT DF I Y     F L G+T
Sbjct: 966  YLTHTRPDXAFAVGVISRFMHCPSKQHLGAAKRLLRYIAGTYDFRIWYGHVQEFKLVGYT 1025

Query: 183  DSDWCGDLTDRRSTSGFVFNLGSGAICWASKKQDVVALSSTEAEYIALCGACCHGVWMKK 362
            DSDW G L DR+STSG++F+LGSGA+CW+SKKQ V ALSS+EAEY A   + C  VW+++
Sbjct: 1026 DSDWAGCLEDRKSTSGYMFSLGSGAVCWSSKKQAVTALSSSEAEYTAATSSACQAVWLRR 1085

Query: 363  MLADFGVQSEEAIPIWCDNK 422
            +L D   + EE   I+CDNK
Sbjct: 1086 ILVDINQEHEEXTVIYCDNK 1105


>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
          Length = 1339

 Score =  161 bits (408), Expect = 4e-38
 Identities = 81/141 (57%), Positives = 101/141 (71%), Gaps = 2/141 (1%)
 Frame = +3

Query: 3    YLTHSRPDLMFPVCLLSRFMACPTKIQFAAARNVLRYIAGTLDFGIQYYRSSNFALQ--G 176
            YLT +RPDLM+ VCL+SRFM+ P    + AA+ +LRY+ GT++ GI Y R  N +L+   
Sbjct: 1124 YLTVTRPDLMYGVCLISRFMSNPRMSHWLAAKRILRYLKGTVELGIFYRRRKNRSLKLMA 1183

Query: 177  FTDSDWCGDLTDRRSTSGFVFNLGSGAICWASKKQDVVALSSTEAEYIALCGACCHGVWM 356
            FTDSD+ GDL DRRSTSGFVF + SGAICWASKKQ VVALS+TEAEYIA     C  VW+
Sbjct: 1184 FTDSDYAGDLNDRRSTSGFVFLMASGAICWASKKQPVVALSTTEAEYIAAAFCACQCVWL 1243

Query: 357  KKMLADFGVQSEEAIPIWCDN 419
            +K+L   G + + A  I CDN
Sbjct: 1244 RKVLEKLGAEEKSATVINCDN 1264


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