BLASTX nr result

ID: Dioscorea21_contig00038479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038479
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22025.3| unnamed protein product [Vitis vinifera]               92   3e-17
ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi...    92   3e-17
ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containi...    83   2e-14
ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containi...    82   3e-14
tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea m...    81   1e-13

>emb|CBI22025.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/80 (56%), Positives = 57/80 (71%)
 Frame = +1

Query: 124 EPNLVSQLLQGCITNQSLKPAQQLHAAIITTGAASDRFTSNHLLNMYAKLRQLPTASALF 303
           EP+L S LLQ CI+  SL   +QLH+ IIT+G +SD+F SNHLLN+Y+K  QL TA  LF
Sbjct: 51  EPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLF 110

Query: 304 KTMAHKNIMSSNILLGGFIQ 363
             M  KNIMS NIL+ G+ +
Sbjct: 111 GVMPRKNIMSCNILINGYFR 130


>ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/80 (56%), Positives = 57/80 (71%)
 Frame = +1

Query: 124 EPNLVSQLLQGCITNQSLKPAQQLHAAIITTGAASDRFTSNHLLNMYAKLRQLPTASALF 303
           EP+L S LLQ CI+  SL   +QLH+ IIT+G +SD+F SNHLLN+Y+K  QL TA  LF
Sbjct: 51  EPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLF 110

Query: 304 KTMAHKNIMSSNILLGGFIQ 363
             M  KNIMS NIL+ G+ +
Sbjct: 111 GVMPRKNIMSCNILINGYFR 130


>ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
           gi|449526872|ref|XP_004170437.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/80 (48%), Positives = 55/80 (68%)
 Frame = +1

Query: 124 EPNLVSQLLQGCITNQSLKPAQQLHAAIITTGAASDRFTSNHLLNMYAKLRQLPTASALF 303
           +P+L S LLQ CI   SL   +Q+H+ IIT+G + D+F SNHLLN Y+KL Q  ++  LF
Sbjct: 61  DPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLF 120

Query: 304 KTMAHKNIMSSNILLGGFIQ 363
             M  +N+MS NIL+ G++Q
Sbjct: 121 SNMPRRNVMSFNILINGYLQ 140


>ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Glycine max]
          Length = 674

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 41/85 (48%), Positives = 56/85 (65%)
 Frame = +1

Query: 106 LPGISLEPNLVSQLLQGCITNQSLKPAQQLHAAIITTGAASDRFTSNHLLNMYAKLRQLP 285
           L  I  EP L S LLQ CI  +S+   +QLH+ I T+G +SD+F SNHLLN+Y+K  +L 
Sbjct: 62  LSEIWAEPRLFSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQ 121

Query: 286 TASALFKTMAHKNIMSSNILLGGFI 360
            A ALF  M  +NIMS NI++  ++
Sbjct: 122 AAVALFDRMPRRNIMSCNIMIKAYL 146


>tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
          Length = 647

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 45/99 (45%), Positives = 62/99 (62%)
 Frame = +1

Query: 67  KVKEDCLQLRRETLPGISLEPNLVSQLLQGCITNQSLKPAQQLHAAIITTGAASDRFTSN 246
           +VKE    L R    G+  EP L S + + C   Q+L   +QLHA   T+GAA+DRFT+N
Sbjct: 28  RVKE---ALHRRFREGLWSEPGLFSHIFRAC---QALPLLRQLHAFAATSGAAADRFTAN 81

Query: 247 HLLNMYAKLRQLPTASALFKTMAHKNIMSSNILLGGFIQ 363
           HLL  YA L   PTA  LF+ +  +N+MS NIL+GG+++
Sbjct: 82  HLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVK 120


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