BLASTX nr result

ID: Dioscorea21_contig00038470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038470
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-l...   133   2e-29
ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-l...   130   8e-29
emb|CBI38559.3| unnamed protein product [Vitis vinifera]              130   8e-29
ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
gb|ACY64665.1| SRS2 [Arabidopsis thaliana]                            127   9e-28

>ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-like [Glycine max]
          Length = 1123

 Score =  133 bits (334), Expect = 2e-29
 Identities = 60/91 (65%), Positives = 80/91 (87%)
 Frame = -3

Query: 274 QIVEYVEKVSAVRNCSFISAAGEIFDAKISGTFKRTQLTHGRKVLSTLSMLTRLVQSEKS 95
           +I++++ K+S +R CSF+SAA +IF AKISGTFKR++LTHGRK+L TL M+++L+Q EKS
Sbjct: 660 RIIDHINKISTIRRCSFLSAASDIFSAKISGTFKRSELTHGRKILMTLEMISKLIQREKS 719

Query: 94  ISVVISSTANLLPQKYLLEQRAVVDVDGGKL 2
           IS +ISS AN++P+KYLLEQRAVVDVDGG L
Sbjct: 720 ISAIISSVANMIPEKYLLEQRAVVDVDGGTL 750


>ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-like [Vitis vinifera]
          Length = 1113

 Score =  130 bits (328), Expect = 8e-29
 Identities = 61/91 (67%), Positives = 79/91 (86%)
 Frame = -3

Query: 274 QIVEYVEKVSAVRNCSFISAAGEIFDAKISGTFKRTQLTHGRKVLSTLSMLTRLVQSEKS 95
           +++E+++K+S  R CSF+SAA +IF AK+SGTFKR+QLT GRKVL TL M+++LV  E+S
Sbjct: 651 RVIEHIDKISITRKCSFVSAASDIFSAKVSGTFKRSQLTQGRKVLFTLDMISKLVHREQS 710

Query: 94  ISVVISSTANLLPQKYLLEQRAVVDVDGGKL 2
           IS VI+S AN++PQKYLLEQRAVVDVDGGKL
Sbjct: 711 ISAVITSVANMIPQKYLLEQRAVVDVDGGKL 741


>emb|CBI38559.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  130 bits (328), Expect = 8e-29
 Identities = 61/91 (67%), Positives = 79/91 (86%)
 Frame = -3

Query: 274 QIVEYVEKVSAVRNCSFISAAGEIFDAKISGTFKRTQLTHGRKVLSTLSMLTRLVQSEKS 95
           +++E+++K+S  R CSF+SAA +IF AK+SGTFKR+QLT GRKVL TL M+++LV  E+S
Sbjct: 449 RVIEHIDKISITRKCSFVSAASDIFSAKVSGTFKRSQLTQGRKVLFTLDMISKLVHREQS 508

Query: 94  ISVVISSTANLLPQKYLLEQRAVVDVDGGKL 2
           IS VI+S AN++PQKYLLEQRAVVDVDGGKL
Sbjct: 509 ISAVITSVANMIPQKYLLEQRAVVDVDGGKL 539


>ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|222832580|gb|EEE71057.1|
           predicted protein [Populus trichocarpa]
          Length = 1056

 Score =  129 bits (324), Expect = 2e-28
 Identities = 62/90 (68%), Positives = 79/90 (87%)
 Frame = -3

Query: 274 QIVEYVEKVSAVRNCSFISAAGEIFDAKISGTFKRTQLTHGRKVLSTLSMLTRLVQSEKS 95
           +++E+V+K+S VR CSFI+AA ++F AKISGTFKR+QLT GRKVLSTL M+++LV  E+S
Sbjct: 595 RVIEHVDKISTVRKCSFIAAACDVFSAKISGTFKRSQLTQGRKVLSTLQMISKLVHREQS 654

Query: 94  ISVVISSTANLLPQKYLLEQRAVVDVDGGK 5
           IS VI+S AN++PQKYLLEQRAVVD DGGK
Sbjct: 655 ISAVITSVANMVPQKYLLEQRAVVDSDGGK 684


>gb|ACY64665.1| SRS2 [Arabidopsis thaliana]
          Length = 1147

 Score =  127 bits (319), Expect = 9e-28
 Identities = 61/91 (67%), Positives = 77/91 (84%)
 Frame = -3

Query: 274 QIVEYVEKVSAVRNCSFISAAGEIFDAKISGTFKRTQLTHGRKVLSTLSMLTRLVQSEKS 95
           +I+E++EK+S  R CSFISAA +IF+AKISGTFKR+QLT GRKVL TL M+ +LV  E+S
Sbjct: 690 RIIEHIEKISTSRKCSFISAASDIFNAKISGTFKRSQLTQGRKVLQTLDMVAKLVDREQS 749

Query: 94  ISVVISSTANLLPQKYLLEQRAVVDVDGGKL 2
           +S V++  AN++PQKYLLEQRAVVD DGGKL
Sbjct: 750 LSAVVTCVANMIPQKYLLEQRAVVDNDGGKL 780


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