BLASTX nr result
ID: Dioscorea21_contig00038411
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00038411
(473 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD30981.1| putative fertility restorer homologue [Oryza sat... 103 1e-20
gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indi... 103 1e-20
gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japo... 103 1e-20
gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonic... 103 1e-20
ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containi... 98 6e-19
>dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer
homologue [Oryza sativa Japonica Group]
Length = 918
Score = 103 bits (258), Expect = 1e-20
Identities = 45/65 (69%), Positives = 55/65 (84%)
Frame = +2
Query: 275 AVRMVDLMKENGCKPDEWTYTELICGFCSGGKLDIAYKMFEEMVGLGLKPNEVTYTALID 454
A+R++DLM++ GCKPDEW+YTELICGFC K++ A+ +F EMV GL PNEVTYTALID
Sbjct: 479 ALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALID 538
Query: 455 GYCKD 469
GYCKD
Sbjct: 539 GYCKD 543
Score = 55.1 bits (131), Expect = 6e-06
Identities = 26/53 (49%), Positives = 33/53 (62%)
Frame = +2
Query: 296 MKENGCKPDEWTYTELICGFCSGGKLDIAYKMFEEMVGLGLKPNEVTYTALID 454
MK GC+P+ +TYT LI G C G L +A +F M G+ PN VTY ALI+
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 398
Score = 54.7 bits (130), Expect = 8e-06
Identities = 25/57 (43%), Positives = 34/57 (59%)
Frame = +2
Query: 302 ENGCKPDEWTYTELICGFCSGGKLDIAYKMFEEMVGLGLKPNEVTYTALIDGYCKDG 472
E+ PD +TYT +I G C LD A ++F +M G +PN VTY+ LI+G C G
Sbjct: 243 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSG 299
>gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer
homologue [Oryza sativa Indica Group]
Length = 918
Score = 103 bits (258), Expect = 1e-20
Identities = 45/65 (69%), Positives = 55/65 (84%)
Frame = +2
Query: 275 AVRMVDLMKENGCKPDEWTYTELICGFCSGGKLDIAYKMFEEMVGLGLKPNEVTYTALID 454
A+R++DLM++ GCKPDEW+YTELICGFC K++ A+ +F EMV GL PNEVTYTALID
Sbjct: 479 ALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALID 538
Query: 455 GYCKD 469
GYCKD
Sbjct: 539 GYCKD 543
Score = 54.7 bits (130), Expect = 8e-06
Identities = 25/57 (43%), Positives = 34/57 (59%)
Frame = +2
Query: 302 ENGCKPDEWTYTELICGFCSGGKLDIAYKMFEEMVGLGLKPNEVTYTALIDGYCKDG 472
E+ PD +TYT +I G C LD A ++F +M G +PN VTY+ LI+G C G
Sbjct: 243 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSG 299
Score = 54.7 bits (130), Expect = 8e-06
Identities = 26/53 (49%), Positives = 33/53 (62%)
Frame = +2
Query: 296 MKENGCKPDEWTYTELICGFCSGGKLDIAYKMFEEMVGLGLKPNEVTYTALID 454
MK GC+P+ +TYT LI G C G L +A +F M G+ PN VTY ALI+
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALIN 398
>gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 103 bits (258), Expect = 1e-20
Identities = 45/65 (69%), Positives = 55/65 (84%)
Frame = +2
Query: 275 AVRMVDLMKENGCKPDEWTYTELICGFCSGGKLDIAYKMFEEMVGLGLKPNEVTYTALID 454
A+R++DLM++ GCKPDEW+YTELICGFC K++ A+ +F EMV GL PNEVTYTALID
Sbjct: 649 ALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALID 708
Query: 455 GYCKD 469
GYCKD
Sbjct: 709 GYCKD 713
Score = 55.1 bits (131), Expect = 6e-06
Identities = 26/53 (49%), Positives = 33/53 (62%)
Frame = +2
Query: 296 MKENGCKPDEWTYTELICGFCSGGKLDIAYKMFEEMVGLGLKPNEVTYTALID 454
MK GC+P+ +TYT LI G C G L +A +F M G+ PN VTY ALI+
Sbjct: 516 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 568
Score = 54.7 bits (130), Expect = 8e-06
Identities = 25/57 (43%), Positives = 34/57 (59%)
Frame = +2
Query: 302 ENGCKPDEWTYTELICGFCSGGKLDIAYKMFEEMVGLGLKPNEVTYTALIDGYCKDG 472
E+ PD +TYT +I G C LD A ++F +M G +PN VTY+ LI+G C G
Sbjct: 413 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSG 469
>gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer
[Oryza sativa Japonica Group]
Length = 1007
Score = 103 bits (258), Expect = 1e-20
Identities = 45/65 (69%), Positives = 55/65 (84%)
Frame = +2
Query: 275 AVRMVDLMKENGCKPDEWTYTELICGFCSGGKLDIAYKMFEEMVGLGLKPNEVTYTALID 454
A+R++DLM++ GCKPDEW+YTELICGFC K++ A+ +F EMV GL PNEVTYTALID
Sbjct: 479 ALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALID 538
Query: 455 GYCKD 469
GYCKD
Sbjct: 539 GYCKD 543
Score = 55.1 bits (131), Expect = 6e-06
Identities = 26/53 (49%), Positives = 33/53 (62%)
Frame = +2
Query: 296 MKENGCKPDEWTYTELICGFCSGGKLDIAYKMFEEMVGLGLKPNEVTYTALID 454
MK GC+P+ +TYT LI G C G L +A +F M G+ PN VTY ALI+
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 398
Score = 54.7 bits (130), Expect = 8e-06
Identities = 25/57 (43%), Positives = 34/57 (59%)
Frame = +2
Query: 302 ENGCKPDEWTYTELICGFCSGGKLDIAYKMFEEMVGLGLKPNEVTYTALIDGYCKDG 472
E+ PD +TYT +I G C LD A ++F +M G +PN VTY+ LI+G C G
Sbjct: 243 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSG 299
>ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 98.2 bits (243), Expect = 6e-19
Identities = 43/65 (66%), Positives = 53/65 (81%)
Frame = +2
Query: 275 AVRMVDLMKENGCKPDEWTYTELICGFCSGGKLDIAYKMFEEMVGLGLKPNEVTYTALID 454
A+R+++LMK NGC+PDEW+YTELI GFC K+++A MF EM+ GL PNEVTYTALI
Sbjct: 489 AIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALIS 548
Query: 455 GYCKD 469
GYCKD
Sbjct: 549 GYCKD 553
Score = 59.7 bits (143), Expect = 2e-07
Identities = 26/66 (39%), Positives = 41/66 (62%)
Frame = +2
Query: 275 AVRMVDLMKENGCKPDEWTYTELICGFCSGGKLDIAYKMFEEMVGLGLKPNEVTYTALID 454
A +++ + ++G KPD +TYT +I G+C LD A+++F M G +PN TY+ LI+
Sbjct: 247 AESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLIN 306
Query: 455 GYCKDG 472
G C G
Sbjct: 307 GLCNSG 312
Score = 56.6 bits (135), Expect = 2e-06
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +1
Query: 1 CSRDSQTYNELIRGFCLIGMTEKAMVLFDRMIRRGPLPTQVTYNTIV 141
C ++ +YNELIRG+C IG TEKAM + M++ P PT VTYN I+
Sbjct: 431 CLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIII 477