BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038382
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...    91   1e-16
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...    91   1e-16
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]      91   1e-16
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...    91   1e-16
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]      91   1e-16

>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1073

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/82 (50%), Positives = 64/82 (78%)
 Frame = +1

Query: 1   MMLATMTPELQKQFEDMEAYIIMVSLKEMFQEQARHERFMTAKALTSCKMALGTSVSAHV 180
           +MLATM+PELQ+Q+E ++A+ I+  L+ MF++QAR ERF T+K+L +C++A G  VS HV
Sbjct: 170 LMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACRLAEGNPVSPHV 229

Query: 181 LKMKGYIDTKEKLDAPIRKELS 246
           +KM GY ++ +KL  P+ +EL+
Sbjct: 230 IKMIGYTESLDKLGFPLSRELA 251


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
           gi|62701883|gb|AAX92956.1| retrotransposon protein,
           putative, Ty1-copia sub-class [Oryza sativa Japonica
           Group] gi|108864259|gb|ABA92827.2| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1184

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/82 (51%), Positives = 64/82 (78%)
 Frame = +1

Query: 1   MMLATMTPELQKQFEDMEAYIIMVSLKEMFQEQARHERFMTAKALTSCKMALGTSVSAHV 180
           +MLATM+PELQ+Q+E ++A+ I+  L+ MF++QAR +RF T+K+L +C++A G  VS HV
Sbjct: 78  LMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAKRFNTSKSLFACRLAEGNPVSPHV 137

Query: 181 LKMKGYIDTKEKLDAPIRKELS 246
           +KM GY +T EKL  P+ +EL+
Sbjct: 138 IKMIGYNETLEKLGFPLSQELA 159


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/82 (50%), Positives = 64/82 (78%)
 Frame = +1

Query: 1   MMLATMTPELQKQFEDMEAYIIMVSLKEMFQEQARHERFMTAKALTSCKMALGTSVSAHV 180
           +MLATM+PELQ+Q+E ++A+ I+  L+ MF++QAR ERF T+K+L +C++A G  VS HV
Sbjct: 170 LMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACRLAEGNPVSPHV 229

Query: 181 LKMKGYIDTKEKLDAPIRKELS 246
           +KM GY ++ +KL  P+ +EL+
Sbjct: 230 IKMIGYTESLDKLGFPLSRELA 251


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1248

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/82 (50%), Positives = 64/82 (78%)
 Frame = +1

Query: 1   MMLATMTPELQKQFEDMEAYIIMVSLKEMFQEQARHERFMTAKALTSCKMALGTSVSAHV 180
           +MLATM+PELQ+Q+E ++A+ I+  L+ MF++QAR ERF T+K+L +C++A G  VS HV
Sbjct: 145 LMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACRLAEGNLVSPHV 204

Query: 181 LKMKGYIDTKEKLDAPIRKELS 246
           +KM GY ++ +KL  P+ +EL+
Sbjct: 205 IKMIGYTESLDKLGFPLSRELA 226


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/82 (50%), Positives = 64/82 (78%)
 Frame = +1

Query: 1   MMLATMTPELQKQFEDMEAYIIMVSLKEMFQEQARHERFMTAKALTSCKMALGTSVSAHV 180
           +MLATM+PELQ+Q+E ++A+ I+  L+ MF++QAR ERF T+K+L +C++A G  VS HV
Sbjct: 78  LMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACRLAEGNLVSPHV 137

Query: 181 LKMKGYIDTKEKLDAPIRKELS 246
           +KM GY ++ +KL  P+ +EL+
Sbjct: 138 IKMIGYTESLDKLGFPLSRELA 159