BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038376
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF18538.1|AC006551_24 Very similar to retrotransposon revers...    90   2e-16
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]              89   4e-16
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]               89   4e-16
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...    85   7e-15
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta...    84   9e-15

>gb|AAF18538.1|AC006551_24 Very similar to retrotransposon reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 47/131 (35%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
 Frame = +3

Query: 33  HFTTLWKNPEPRPLD-WFINALPSDFPTLFIDQQSS-LIMPVSKDEIYTTLLSLPDGKSP 206
           +F+ L+K+  P     WF+      F    IDQ +  LI PVS +EI   + S+    +P
Sbjct: 280 YFSNLFKSSNPSGFSHWFVG-----FEAKVIDQMNERLIRPVSSEEIKDAVFSIDPSSAP 334

Query: 207 GPDGMNVEFYKFFWTNIENHLVPAINYFFHNAVMPRAWGRTYITLIQKKDHPKFASDFRH 386
           G DGM+  F++ +W  + +H+   +   F   VMP  W  T++ LI K  HP   SD R 
Sbjct: 335 GSDGMSGLFFQHYWAIVGDHVTREVKMVFQTGVMPTEWNYTHLCLIPKVTHPVLMSDLRP 394

Query: 387 ISLCNMAYKII 419
           ISLC++ YKI+
Sbjct: 395 ISLCSVLYKIV 405


>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
          Length = 1270

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
 Frame = +3

Query: 33  HFTTLWKNPEPRPL-DWFINALPSDFPTLFIDQQSSLIMPVSKDEIYTTLLSLPDGKSPG 209
           +F  L+K+  P    DWF   +P     +      SL+  VS  EI   + S+    +PG
Sbjct: 355 YFGNLFKSSNPSGFTDWFSGLVPRVSEVM----NESLVGEVSAQEIKEAVFSIKPASAPG 410

Query: 210 PDGMNVEFYKFFWTNIENHLVPAINYFFHNAVMPRAWGRTYITLIQKKDHPKFASDFRHI 389
           PDGM+  F++ +W+ + N +   +  FF + +MP  W  T++ LI K  HP    D R I
Sbjct: 411 PDGMSALFFQHYWSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIPKTQHPTEMVDLRPI 470

Query: 390 SLCNMAYKII 419
           SLC++ YKII
Sbjct: 471 SLCSVLYKII 480


>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
          Length = 1254

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
 Frame = +3

Query: 33  HFTTLWKNPEPRPL-DWFINALPSDFPTLFIDQQSSLIMPVSKDEIYTTLLSLPDGKSPG 209
           +F  L+K+  P    DWF   +P     +      SL+  VS  EI   + S+    +PG
Sbjct: 358 YFGNLFKSSNPSGFTDWFSGLVPRVSEVM----NESLVGEVSAQEIKEAVFSIKPASAPG 413

Query: 210 PDGMNVEFYKFFWTNIENHLVPAINYFFHNAVMPRAWGRTYITLIQKKDHPKFASDFRHI 389
           PDGM+  F++ +W+ + N +   +  FF + +MP  W  T++ LI K  HP    D R I
Sbjct: 414 PDGMSALFFQHYWSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIPKTQHPTEMVDLRPI 473

Query: 390 SLCNMAYKII 419
           SLC++ YKII
Sbjct: 474 SLCSVLYKII 483


>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 653

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/94 (43%), Positives = 53/94 (56%)
 Frame = +3

Query: 138 LIMPVSKDEIYTTLLSLPDGKSPGPDGMNVEFYKFFWTNIENHLVPAINYFFHNAVMPRA 317
           LI P + +E    +  +   K+PGPDG+N  FYK FWT     +V A   + H   +P A
Sbjct: 16  LIAPFTDEEFRDAIFQMQSDKAPGPDGLNPTFYKRFWTLCGEEVVAACRRWLHEGNLPTA 75

Query: 318 WGRTYITLIQKKDHPKFASDFRHISLCNMAYKII 419
            G T I LI K DHP+   D R ISLCN+ YKI+
Sbjct: 76  LGDTNIVLIPKCDHPRTMRDLRPISLCNVVYKIL 109


>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1449

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 49/136 (36%), Positives = 68/136 (50%), Gaps = 13/136 (9%)
 Frame = +3

Query: 51   KNPEPRPLDWFINALPSDFPTLFIDQQSSLI----MPVSKD---------EIYTTLLSLP 191
            KN   R    F+  +P+D+  + +++ +SL+     P  KD         EI   L S+P
Sbjct: 822  KNETERFFQEFLQLIPNDYEGITVEKLTSLLPYHCSPAEKDMLTASVSAKEIRGALFSMP 881

Query: 192  DGKSPGPDGMNVEFYKFFWTNIENHLVPAINYFFHNAVMPRAWGRTYITLIQKKDHPKFA 371
            + KSPGPDG   EFYK  W  I    V A+  FF    +P+    T + LI KK   K  
Sbjct: 882  NDKSPGPDGYTSEFYKRAWDIIGAEFVLAVKSFFEKGFLPKGVNTTILALIPKKLEAKEM 941

Query: 372  SDFRHISLCNMAYKII 419
             D+R IS CN+ YK+I
Sbjct: 942  KDYRPISCCNVIYKVI 957