BLASTX nr result

ID: Dioscorea21_contig00038344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038344
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   174   5e-42
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]   166   1e-39
gb|ABW74566.1| integrase [Boechera divaricarpa]                       161   4e-38
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   157   1e-36
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]   155   2e-36

>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  174 bits (442), Expect = 5e-42
 Identities = 86/159 (54%), Positives = 109/159 (68%)
 Frame = +1

Query: 1    FKRSMTEHTLYTKAGDNDAVLLVCIYVDDIIYXXXXLEMMTRFREDMQKSFEMSDLGLMS 180
            F+RS  E TLY K    D  LLVC+YVDD+IY      ++  F+ +M ++FEMSDLGL+ 
Sbjct: 988  FRRSDNEPTLYLKKQGTDEFLLVCLYVDDMIYIGSSKSLVNDFKSNMMRNFEMSDLGLLK 1047

Query: 181  YFLGLEVKQDAAGIHVSQKKYVEDLLKSFNMMNCKPTITPLSSSSKLSLFDEAEPANATA 360
            YFLGLEV QD  GI +SQKKY EDLLK F MMNC+   TP++ + KL   D  E AN   
Sbjct: 1048 YFLGLEVIQDKDGIFISQKKYAEDLLKKFQMMNCEVATTPMNINEKLQRADGTEKANPKL 1107

Query: 361  YRKLIGKLIYVTQSRPDIAFSVNLLSRFMHQPTKNQFGA 477
            +R L+G L Y+T +RPDIAFSV+++SRF+  PTK  FGA
Sbjct: 1108 FRSLVGGLNYLTHTRPDIAFSVSVVSRFLQSPTKQHFGA 1146


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score =  166 bits (421), Expect = 1e-39
 Identities = 80/159 (50%), Positives = 110/159 (69%)
 Frame = +1

Query: 1    FKRSMTEHTLYTKAGDNDAVLLVCIYVDDIIYXXXXLEMMTRFREDMQKSFEMSDLGLMS 180
            F++S +E  LY K    + +L++C+YVDD+IY      ++  F+  M+K FEMSDLGL+ 
Sbjct: 1088 FEKSKSEPNLYLKRQGKNDLLIICLYVDDMIYMGSSSSLINEFKACMKKKFEMSDLGLLH 1147

Query: 181  YFLGLEVKQDAAGIHVSQKKYVEDLLKSFNMMNCKPTITPLSSSSKLSLFDEAEPANATA 360
            +FLGLEVKQ   G+ VSQ+KY  DLLK FNM+NCK    P++S+ KL   D  E A+A  
Sbjct: 1148 FFLGLEVKQVEDGVFVSQRKYAVDLLKKFNMLNCKVVAIPMNSNEKLQAEDGTERADARR 1207

Query: 361  YRKLIGKLIYVTQSRPDIAFSVNLLSRFMHQPTKNQFGA 477
            +R L+G LIY+T +RPDIAF+V ++SRFMH P+K   GA
Sbjct: 1208 FRSLVGGLIYLTHTRPDIAFAVGVISRFMHCPSKQHLGA 1246


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  161 bits (408), Expect = 4e-38
 Identities = 80/159 (50%), Positives = 107/159 (67%)
 Frame = +1

Query: 1    FKRSMTEHTLYTKAGDNDAVLLVCIYVDDIIYXXXXLEMMTRFREDMQKSFEMSDLGLMS 180
            F+RS +E TLY K      +L+VC+YVDD+IY      +++ F+  M + FEM+DLGL+ 
Sbjct: 819  FERSKSEPTLYIKKQGAGDILVVCLYVDDMIYMGSSASLVSEFKASMMEKFEMTDLGLLY 878

Query: 181  YFLGLEVKQDAAGIHVSQKKYVEDLLKSFNMMNCKPTITPLSSSSKLSLFDEAEPANATA 360
            +FLGLEVKQ   G+ VSQ KY  DLLK F+M  C    TP++ + KL   D  E A+AT 
Sbjct: 879  FFLGLEVKQVEDGVFVSQHKYACDLLKRFDMAGCNAVETPMNVNEKLLAGDGTEKADATK 938

Query: 361  YRKLIGKLIYVTQSRPDIAFSVNLLSRFMHQPTKNQFGA 477
            +R L+G LIY+T +RPDI F+V+ +SRFMH PTK  FGA
Sbjct: 939  FRSLVGGLIYLTHTRPDICFAVSAISRFMHGPTKQHFGA 977


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  157 bits (396), Expect = 1e-36
 Identities = 77/159 (48%), Positives = 106/159 (66%)
 Frame = +1

Query: 1    FKRSMTEHTLYTKAGDNDAVLLVCIYVDDIIYXXXXLEMMTRFREDMQKSFEMSDLGLMS 180
            F+RS +E  LY K    + +L++C+YVDD+IY      ++  F+  M+K FEMS+LGL+ 
Sbjct: 917  FERSKSEPNLYLKRQGKNDLLIICLYVDDMIYMGSSSSLINEFKACMKKKFEMSBLGLLH 976

Query: 181  YFLGLEVKQDAAGIHVSQKKYVEDLLKSFNMMNCKPTITPLSSSSKLSLFDEAEPANATA 360
            +FL LEVKQ   G+ VSQ+KY  DLLK FNM+NCK   T ++S+ KL   D  E A+A  
Sbjct: 977  FFLXLEVKQVEDGVFVSQRKYXVDLLKKFNMLNCKVVATXMNSNEKLQAEDGTERADARR 1036

Query: 361  YRKLIGKLIYVTQSRPDIAFSVNLLSRFMHQPTKNQFGA 477
            +  L+  LIY+T +RPDIAF V ++SRFMH P+K   GA
Sbjct: 1037 FXSLVRGLIYLTHTRPDIAFPVEVISRFMHCPSKQHLGA 1075


>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
          Length = 1424

 Score =  155 bits (393), Expect = 2e-36
 Identities = 74/159 (46%), Positives = 105/159 (66%)
 Frame = +1

Query: 1    FKRSMTEHTLYTKAGDNDAVLLVCIYVDDIIYXXXXLEMMTRFREDMQKSFEMSDLGLMS 180
            F RS +E TLY K+ DN  +L+V +YVDD+I+     +M+ +FR +M K +EMSD+GL+ 
Sbjct: 1078 FIRSKSEPTLYVKSKDNSQILIVALYVDDLIFTGNDEKMVEKFRNEMMKKYEMSDMGLLH 1137

Query: 181  YFLGLEVKQDAAGIHVSQKKYVEDLLKSFNMMNCKPTITPLSSSSKLSLFDEAEPANATA 360
            YFLG+EV Q+  G+ + QK+YVE +LK F M  C    TPL  + KL   D  +  + T 
Sbjct: 1138 YFLGIEVYQEEDGVFICQKRYVEHILKKFGMAGCNXVSTPLVVNEKLRKEDGGKMVDETH 1197

Query: 361  YRKLIGKLIYVTQSRPDIAFSVNLLSRFMHQPTKNQFGA 477
            +R L+G L+Y+T +RPDI F+ +LLSRFMH P+    GA
Sbjct: 1198 FRSLVGNLLYLTATRPDIMFAASLLSRFMHYPSHLHLGA 1236


Top