BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038329
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69359.1| hypothetical protein VITISV_024911 [Vitis vinifera]   110   9e-23
ref|XP_003630831.1| 50S ribosomal protein L17 [Medicago truncatu...    87   1e-15
gb|AEJ72555.1| putative retroelement polyprotein [Malus x domest...    87   1e-15
gb|ACB59199.1| copia-like protein [Brassica oleracea]                  86   2e-15
gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arab...    86   4e-15

>emb|CAN69359.1| hypothetical protein VITISV_024911 [Vitis vinifera]
          Length = 696

 Score =  110 bits (276), Expect = 9e-23
 Identities = 52/81 (64%), Positives = 58/81 (71%)
 Frame = +3

Query: 3   NMHVKLVGYFDANYAGDKSDRKSTSGYCTFVGGNFVTWKSKKQTVXXXXXXXXXXXXXXH 182
           N H+ LVG+ +ANY GDK DRKSTSGYCTFV GN VTWKSKKQTV              H
Sbjct: 533 NKHMNLVGFSNANYVGDKGDRKSTSGYCTFVXGNLVTWKSKKQTVVSKSSAEAEYRAMAH 592

Query: 183 TTCELIWLKALLKDFNIIYSD 245
           TTCELIWLKALL+ F+I Y+D
Sbjct: 593 TTCELIWLKALLEHFSITYTD 613


>ref|XP_003630831.1| 50S ribosomal protein L17 [Medicago truncatula]
           gi|355524853|gb|AET05307.1| 50S ribosomal protein L17
           [Medicago truncatula]
          Length = 438

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 39/74 (52%), Positives = 49/74 (66%)
 Frame = +3

Query: 9   HVKLVGYFDANYAGDKSDRKSTSGYCTFVGGNFVTWKSKKQTVXXXXXXXXXXXXXXHTT 188
           H  +VGY DA++AGD SDR+STS YC FVGGN ++WKSKKQTV              H T
Sbjct: 211 HTNIVGYSDADWAGDASDRRSTSSYCIFVGGNLISWKSKKQTVVARSSTEAEYRAMAHAT 270

Query: 189 CELIWLKALLKDFN 230
            EL+WLK LL++ +
Sbjct: 271 SELVWLKHLLQELS 284


>gb|AEJ72555.1| putative retroelement polyprotein [Malus x domestica]
          Length = 1249

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/74 (56%), Positives = 49/74 (66%)
 Frame = +3

Query: 3    NMHVKLVGYFDANYAGDKSDRKSTSGYCTFVGGNFVTWKSKKQTVXXXXXXXXXXXXXXH 182
            N H+  VGY DA++ G K DR+ST+GYCTFVGGN VTWKSKKQ+V               
Sbjct: 1088 NAHI--VGYTDADWGGSKIDRRSTTGYCTFVGGNLVTWKSKKQSVVARSSAEAEYRAMAS 1145

Query: 183  TTCELIWLKALLKD 224
            TTCELIWL+ LL D
Sbjct: 1146 TTCELIWLQGLLND 1159


>gb|ACB59199.1| copia-like protein [Brassica oleracea]
          Length = 975

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 39/82 (47%), Positives = 52/82 (63%)
 Frame = +3

Query: 3    NMHVKLVGYFDANYAGDKSDRKSTSGYCTFVGGNFVTWKSKKQTVXXXXXXXXXXXXXXH 182
            N  +++VGY DA++AGD++DR+ST+GYCTF+GGN VTWKSKKQ V               
Sbjct: 811  NGSIEVVGYCDADWAGDRADRRSTTGYCTFIGGNLVTWKSKKQKVVSCSSAEAEYRAMLK 870

Query: 183  TTCELIWLKALLKDFNIIYSDP 248
             T EL+W+K +LK   I    P
Sbjct: 871  LTNELVWIKGILKHLEIAQDTP 892


>gb|AAG10812.1|AC018460_6 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1404

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/77 (51%), Positives = 48/77 (62%)
 Frame = +3

Query: 3    NMHVKLVGYFDANYAGDKSDRKSTSGYCTFVGGNFVTWKSKKQTVXXXXXXXXXXXXXXH 182
            N   ++VGY DA+YAGD+ DR+S +GYCTF+GGN  TWK+KKQ V               
Sbjct: 1242 NSSTEIVGYCDADYAGDRGDRRSKTGYCTFIGGNLATWKTKKQKVVSCSSAESEYRAMRK 1301

Query: 183  TTCELIWLKALLKDFNI 233
             T EL WLKALLKD  I
Sbjct: 1302 LTNELTWLKALLKDLGI 1318