BLASTX nr result

ID: Dioscorea21_contig00038322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038322
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_177978.1| UDP-glucose 4,6-dehydratase [Arabidopsis thalia...   158   2e-41
dbj|BAJ86835.1| predicted protein [Hordeum vulgare subsp. vulgar...   152   2e-38
ref|XP_002330754.1| predicted protein [Populus trichocarpa] gi|2...   148   2e-38
ref|XP_002271970.1| PREDICTED: probable rhamnose biosynthetic en...   151   5e-38
emb|CAN62061.1| hypothetical protein VITISV_001928 [Vitis vinifera]   151   5e-38

>ref|NP_177978.1| UDP-glucose 4,6-dehydratase [Arabidopsis thaliana]
           gi|62901057|sp|Q9SYM5.1|RHM1_ARATH RecName:
           Full=Probable rhamnose biosynthetic enzyme 1
           gi|4836876|gb|AAD30579.1|AC007260_10 Similar to
           dTDP-D-glucose 4,6-dehydratase [Arabidopsis thaliana]
           gi|14596091|gb|AAK68773.1| Similar to dTDP-D-glucose
           4,6-dehydratase [Arabidopsis thaliana]
           gi|20148285|gb|AAM10033.1| similar to dTDP-D-glucose
           4,6-dehydratase [Arabidopsis thaliana]
           gi|332198001|gb|AEE36122.1| UDP-glucose 4,6-dehydratase
           [Arabidopsis thaliana]
          Length = 669

 Score =  158 bits (400), Expect(2) = 2e-41
 Identities = 74/79 (93%), Positives = 76/79 (96%)
 Frame = -2

Query: 326 YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGQTLPIHGDGSNVRSYLYCEDVAEAFE 147
           YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGQ LPIHGDGSNVRSYLYCEDVAEAFE
Sbjct: 177 YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFE 236

Query: 146 VICHKGEVGHVYNIETRKE 90
           V+ HKGEVGHVYNI T+KE
Sbjct: 237 VVLHKGEVGHVYNIGTKKE 255



 Score = 35.4 bits (80), Expect(2) = 2e-41
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = -1

Query: 84  RVLDVARDVCKLFSLDPEA 28
           RV DVA+D+CKLF++DPEA
Sbjct: 257 RVNDVAKDICKLFNMDPEA 275


>dbj|BAJ86835.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326533294|dbj|BAJ93619.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 675

 Score =  152 bits (384), Expect(2) = 2e-38
 Identities = 72/79 (91%), Positives = 74/79 (93%)
 Frame = -2

Query: 326 YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGQTLPIHGDGSNVRSYLYCEDVAEAFE 147
           YGLPVITTRGNNVYGPNQFPEKLIPKFILLAM+G  LPIHGDGSNVRSYLYCEDVAEAFE
Sbjct: 177 YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMKGLPLPIHGDGSNVRSYLYCEDVAEAFE 236

Query: 146 VICHKGEVGHVYNIETRKE 90
           V+ HKGEVGHVYNI T KE
Sbjct: 237 VVLHKGEVGHVYNIGTVKE 255



 Score = 32.0 bits (71), Expect(2) = 2e-38
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = -1

Query: 84  RVLDVARDVCKLFSLDPE 31
           RV+DVA D+CKLF LD E
Sbjct: 257 RVIDVASDICKLFGLDTE 274


>ref|XP_002330754.1| predicted protein [Populus trichocarpa] gi|222872556|gb|EEF09687.1|
           predicted protein [Populus trichocarpa]
          Length = 660

 Score =  148 bits (373), Expect(2) = 2e-38
 Identities = 66/79 (83%), Positives = 75/79 (94%)
 Frame = -2

Query: 326 YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGQTLPIHGDGSNVRSYLYCEDVAEAFE 147
           YGLP+ITTRGNNVYGPNQ+PEKLIPKFILLA++G+ LPIHGDGSNVRS+LYCEDVAEAF+
Sbjct: 181 YGLPIITTRGNNVYGPNQYPEKLIPKFILLALKGEQLPIHGDGSNVRSFLYCEDVAEAFD 240

Query: 146 VICHKGEVGHVYNIETRKE 90
           VI HKG +GHVYNI T+KE
Sbjct: 241 VILHKGAIGHVYNIGTKKE 259



 Score = 35.8 bits (81), Expect(2) = 2e-38
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -1

Query: 84  RVLDVARDVCKLFSLDPEAAMS 19
           RVLDVA D+CKL+ LDPE +++
Sbjct: 261 RVLDVAEDICKLYGLDPEKSIN 282


>ref|XP_002271970.1| PREDICTED: probable rhamnose biosynthetic enzyme 1 [Vitis vinifera]
          Length = 657

 Score =  151 bits (382), Expect(2) = 5e-38
 Identities = 70/82 (85%), Positives = 75/82 (91%)
 Frame = -2

Query: 326 YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGQTLPIHGDGSNVRSYLYCEDVAEAFE 147
           YGLP ITTRGNNVYGPNQFPEKLIPKFILLAM+G+ LPIHGDGSNVRSYLYCEDVAEAFE
Sbjct: 181 YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGEQLPIHGDGSNVRSYLYCEDVAEAFE 240

Query: 146 VICHKGEVGHVYNIETRKEMIV 81
           V+ HKG +GHVYNI T+KE  V
Sbjct: 241 VVLHKGVIGHVYNIGTKKERSV 262



 Score = 31.2 bits (69), Expect(2) = 5e-38
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = -1

Query: 81  VLDVARDVCKLFSLDPEAAMS 19
           VLDVA D+CKLF LD + A++
Sbjct: 262 VLDVAEDICKLFRLDSKQAIN 282


>emb|CAN62061.1| hypothetical protein VITISV_001928 [Vitis vinifera]
          Length = 619

 Score =  151 bits (382), Expect(2) = 5e-38
 Identities = 70/82 (85%), Positives = 75/82 (91%)
 Frame = -2

Query: 326 YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGQTLPIHGDGSNVRSYLYCEDVAEAFE 147
           YGLP ITTRGNNVYGPNQFPEKLIPKFILLAM+G+ LPIHGDGSNVRSYLYCEDVAEAFE
Sbjct: 181 YGLPTITTRGNNVYGPNQFPEKLIPKFILLAMKGEQLPIHGDGSNVRSYLYCEDVAEAFE 240

Query: 146 VICHKGEVGHVYNIETRKEMIV 81
           V+ HKG +GHVYNI T+KE  V
Sbjct: 241 VVLHKGVIGHVYNIGTKKERSV 262



 Score = 31.2 bits (69), Expect(2) = 5e-38
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = -1

Query: 81  VLDVARDVCKLFSLDPEAAMS 19
           VLDVA D+CKLF LD + A++
Sbjct: 262 VLDVAEDICKLFRLDSKQAIN 282


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