BLASTX nr result

ID: Dioscorea21_contig00038281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038281
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [S...    83   3e-14
gb|AFW71552.1| putative DNA polymerase epsilon catalytic subunit...    79   4e-13
gb|AFW71551.1| putative DNA polymerase epsilon catalytic subunit...    79   4e-13
gb|AFW71549.1| putative DNA polymerase epsilon catalytic subunit...    79   4e-13
dbj|BAD23092.1| putative DNA polymerase epsilon catalytic subuni...    78   6e-13

>ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [Sorghum bicolor]
            gi|241931984|gb|EES05129.1| hypothetical protein
            SORBIDRAFT_04g020730 [Sorghum bicolor]
          Length = 2135

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/57 (68%), Positives = 47/57 (82%)
 Frame = +3

Query: 3    DTLHHLKGKNKMETDDQTSHASQQAAPHPHKGDAALEFIKHVCAVLALDLNVQHDVL 173
            D LHH KGK+K E+D+    A++++ PH HKGDAALEFIKHVCAVLALD NVQHD+L
Sbjct: 1927 DILHHFKGKSKHESDEP---ANRESDPHTHKGDAALEFIKHVCAVLALDQNVQHDIL 1980


>gb|AFW71552.1| putative DNA polymerase epsilon catalytic subunit family protein
           [Zea mays]
          Length = 288

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 37/57 (64%), Positives = 44/57 (77%)
 Frame = +3

Query: 3   DTLHHLKGKNKMETDDQTSHASQQAAPHPHKGDAALEFIKHVCAVLALDLNVQHDVL 173
           D LHH KGK+K E+D+       ++ PH HKGDAALEFIKH+CAVLALD NVQHD+L
Sbjct: 82  DILHHFKGKSKHESDEPA-----KSDPHTHKGDAALEFIKHICAVLALDQNVQHDIL 133


>gb|AFW71551.1| putative DNA polymerase epsilon catalytic subunit family protein [Zea
            mays]
          Length = 1717

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 37/57 (64%), Positives = 44/57 (77%)
 Frame = +3

Query: 3    DTLHHLKGKNKMETDDQTSHASQQAAPHPHKGDAALEFIKHVCAVLALDLNVQHDVL 173
            D LHH KGK+K E+D+       ++ PH HKGDAALEFIKH+CAVLALD NVQHD+L
Sbjct: 1511 DILHHFKGKSKHESDEPA-----KSDPHTHKGDAALEFIKHICAVLALDQNVQHDIL 1562


>gb|AFW71549.1| putative DNA polymerase epsilon catalytic subunit family protein [Zea
            mays]
          Length = 1856

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 37/57 (64%), Positives = 44/57 (77%)
 Frame = +3

Query: 3    DTLHHLKGKNKMETDDQTSHASQQAAPHPHKGDAALEFIKHVCAVLALDLNVQHDVL 173
            D LHH KGK+K E+D+       ++ PH HKGDAALEFIKH+CAVLALD NVQHD+L
Sbjct: 1650 DILHHFKGKSKHESDEPA-----KSDPHTHKGDAALEFIKHICAVLALDQNVQHDIL 1701


>dbj|BAD23092.1| putative DNA polymerase epsilon catalytic subunit protein isoform b
            [Oryza sativa Japonica Group]
          Length = 2257

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 37/57 (64%), Positives = 44/57 (77%)
 Frame = +3

Query: 3    DTLHHLKGKNKMETDDQTSHASQQAAPHPHKGDAALEFIKHVCAVLALDLNVQHDVL 173
            D LHH KGK K E+ + T+   ++  PH HKGDAALEFIKH+CAVLALD NVQHD+L
Sbjct: 2049 DILHHFKGKGKSESVELTN---REPDPHTHKGDAALEFIKHICAVLALDQNVQHDIL 2102


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