BLASTX nr result

ID: Dioscorea21_contig00038279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038279
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328585.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
emb|CAN83787.1| hypothetical protein VITISV_024511 [Vitis vinifera]    83   2e-14
dbj|BAJ25772.1| putative PR-10 type pathogenesis-related protein...    82   6e-14
ref|XP_003546351.1| PREDICTED: major allergen Pru ar 1-like [Gly...    80   1e-13
dbj|BAJ25780.1| putative PR-10 type pathogenesis-related protein...    80   1e-13

>ref|XP_002328585.1| predicted protein [Populus trichocarpa] gi|222838567|gb|EEE76932.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/74 (55%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
 Frame = -1

Query: 221 MGIVTFNEELHCPVSAKRMFHALFEDDHNLIPKIMPN-VKSVDFISGDGSPGSINQVNFV 45
           MG+ ++ +E  CP+S  RMF AL  D +NLIPK++P  VKSVD I GDG  GSI QVNF 
Sbjct: 1   MGVASYTQEFTCPISPARMFKALILDSNNLIPKLLPQIVKSVDLIHGDGGAGSIEQVNFT 60

Query: 44  DGHPVKFVKHRLDK 3
           +G  +K+VKHR+D+
Sbjct: 61  EGTDIKYVKHRIDE 74


>emb|CAN83787.1| hypothetical protein VITISV_024511 [Vitis vinifera]
          Length = 1172

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 34/73 (46%), Positives = 51/73 (69%)
 Frame = -1

Query: 224  SMGIVTFNEELHCPVSAKRMFHALFEDDHNLIPKIMPNVKSVDFISGDGSPGSINQVNFV 45
            +MG+ TF +E+  P++   MF AL  D H L+P +MP++KS++F+ GDG  GSI Q NF 
Sbjct: 1029 NMGVHTFTQEITTPIAPAXMFKALIVDSHXLVPTLMPSIKSIEFVEGDGGVGSIKQTNFP 1088

Query: 44   DGHPVKFVKHRLD 6
            +G   K++KHR+D
Sbjct: 1089 EGSHFKYLKHRID 1101


>dbj|BAJ25772.1| putative PR-10 type pathogenesis-related protein [Nicotiana
           tabacum]
          Length = 158

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 39/73 (53%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
 Frame = -1

Query: 221 MGIVTFNEELHCPVSAKRMFHALFEDDHNLIPKIMPNV-KSVDFISGDGSPGSINQVNFV 45
           MGI+T   E   P+SA RMF +   D+ NL+PKI P V KS++ I GDG PG+I Q NF 
Sbjct: 1   MGILTTTYEFTTPISAPRMFKSFILDEENLLPKIAPQVFKSIEIIHGDGGPGTIKQFNFA 60

Query: 44  DGHPVKFVKHRLD 6
           +G  +KFVKHR+D
Sbjct: 61  EGTEIKFVKHRVD 73


>ref|XP_003546351.1| PREDICTED: major allergen Pru ar 1-like [Glycine max]
          Length = 160

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/74 (51%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
 Frame = -1

Query: 221 MGIVTFNEELHCPVSAKRMFHALFEDDHNLIPKIMPN-VKSVDFISGDGSPGSINQVNFV 45
           MG+ +  +E   P+S  R+F AL  D HNLIPK++PN VKS++ I GDG  GSI Q NFV
Sbjct: 1   MGVYSDTDEYPSPISPSRLFKALVVDAHNLIPKLLPNSVKSIEIIQGDGGAGSIKQFNFV 60

Query: 44  DGHPVKFVKHRLDK 3
           +G+ VK +K+R+D+
Sbjct: 61  EGNQVKNIKNRIDE 74


>dbj|BAJ25780.1| putative PR-10 type pathogenesis-related protein [Nicotiana
           tabacum]
          Length = 161

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
 Frame = -1

Query: 221 MGIVTFNEELHCPVSAKRMFHALFEDDHNLIPKIMPNV-KSVDFISGDGSPGSINQVNFV 45
           MGI+T   E   P+SA RMF +   D  NL+PKI P V KS++ I GDG PG+I Q NF 
Sbjct: 1   MGILTTTYEFTTPISAPRMFKSFILDGENLLPKIAPQVFKSIEIIHGDGGPGTIKQFNFA 60

Query: 44  DGHPVKFVKHRLD 6
           +G  +KFVKHR+D
Sbjct: 61  EGTEIKFVKHRVD 73


Top