BLASTX nr result

ID: Dioscorea21_contig00038256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038256
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO23078.1| polyprotein [Glycine max]                               67   2e-09
ref|XP_003555002.1| PREDICTED: uncharacterized protein LOC100810...    59   5e-07
ref|XP_003555357.1| PREDICTED: uncharacterized protein LOC100813...    57   1e-06

>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
 Frame = -2

Query: 374 HIMDYRALSLQLFLNGKFITLKGEKEQGPQLTSVHQLFRLSSVRSIAEYYQLSAKPTESE 195
           H+ DY AL+L+ F N KFITL+GE         +H   RL + +SI E + +        
Sbjct: 488 HVADYAALTLKFFQNDKFITLQGEGNSEATQAQLHHFRRLQNTKSIEECFAIQL------ 541

Query: 194 EQLAKLNSEVKVSEENPVEGSKHL-TEIPEDLKELLRKYKRVFNIPKGLPPSRLCDHRIT 18
                      + +E P +  K L T I  +L  LL  Y +VF +P  LPP R  DH I 
Sbjct: 542 -----------IQKEVPEDTLKDLPTNIDPELAILLHTYAQVFAVPASLPPQREQDHAIP 590

Query: 17  LQPNS 3
           L+  S
Sbjct: 591 LKQGS 595


>ref|XP_003555002.1| PREDICTED: uncharacterized protein LOC100810380 [Glycine max]
          Length = 1273

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
 Frame = -2

Query: 374 HIMDYRALSLQLFLNGKFITLKGEKEQGPQLTSVHQLFRLSSVRSIAEYYQLS-AKPTES 198
           HI DY +L ++   +GKFITL+G+ +  P    +H + R+ S  SIAE + +   +P+  
Sbjct: 412 HIADYDSLQIKFLHDGKFITLQGDDDGTPTQAHLHHIRRMISTDSIAEVFSMQLIEPSNF 471

Query: 197 EEQLAKLNSEVKVSEENPVEGSKHLTEIPEDLKELLRKYKRVFNIPKGLPPSRLCDHRIT 18
           +  L++L          P+        +  +L  LL  Y+ VF  P  LPP +  DH I 
Sbjct: 472 QFPLSEL----------PI-------NLEPELALLLHTYEFVFETPTSLPPPKSHDHAIP 514

Query: 17  LQPNS 3
           L   S
Sbjct: 515 LLEGS 519


>ref|XP_003555357.1| PREDICTED: uncharacterized protein LOC100813803 [Glycine max]
          Length = 2140

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 38/123 (30%), Positives = 59/123 (47%)
 Frame = -2

Query: 371 IMDYRALSLQLFLNGKFITLKGEKEQGPQLTSVHQLFRLSSVRSIAEYYQLSAKPTESEE 192
           I DY   +++  L G+ I L+ + +      S HQ+ RL S +S +  + LS +P  S E
Sbjct: 319 ITDYTDFTMKFTLFGRPIHLRADVQVNTSPVSAHQVRRLISTKSTSGLFHLSLQPIPSSE 378

Query: 191 QLAKLNSEVKVSEENPVEGSKHLTEIPEDLKELLRKYKRVFNIPKGLPPSRLCDHRITLQ 12
            L         +  +PV            + +LL KY+ +F  P GLPP R  DH+I L 
Sbjct: 379 MLN--------TTPHPVPA----------IDKLLNKYQSLFEAPTGLPPPRQHDHQINLL 420

Query: 11  PNS 3
           P++
Sbjct: 421 PSA 423


Top