BLASTX nr result
ID: Dioscorea21_contig00038222
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00038222
(435 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containi... 192 3e-47
emb|CBI23043.3| unnamed protein product [Vitis vinifera] 192 3e-47
ref|XP_002515645.1| pentatricopeptide repeat-containing protein,... 190 9e-47
ref|XP_002317794.1| predicted protein [Populus trichocarpa] gi|2... 185 3e-45
ref|XP_003544342.1| PREDICTED: pentatricopeptide repeat-containi... 183 1e-44
>ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 192 bits (487), Expect = 3e-47
Identities = 88/145 (60%), Positives = 115/145 (79%)
Frame = +1
Query: 1 FEPNIYTWNGIVAGLMDNGENEFALKMFSEMQTSETKPDVFTVGMILTICSRLISIERGK 180
FEPN+YTWNGI++G ++NG NE AL++F+EMQTS +PD++TVG+IL C+RL +I RGK
Sbjct: 374 FEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGK 433
Query: 181 QSHAYSIRFGYDSHVHVGAALVDMYAKCGNIRLAKYAFDRISHHNLVSFNTMLSGYAMHG 360
Q HA+SIR GY+ VH+GAALVDMYAKCG+I+ A ++RIS+ NLVS N ML+ YAMHG
Sbjct: 434 QVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHG 493
Query: 361 LGHNGLALFHQMLADGSTPDAITFI 435
G G+ALF ML +G PD +TF+
Sbjct: 494 HGDEGIALFRNMLGNGFRPDHVTFL 518
Score = 94.4 bits (233), Expect = 9e-18
Identities = 48/139 (34%), Positives = 81/139 (58%), Gaps = 1/139 (0%)
Frame = +1
Query: 19 TWNGIVAGLMDNGENEFALKMFSEMQTSE-TKPDVFTVGMILTICSRLISIERGKQSHAY 195
+WN +++G DN + AL MF ++ E + D FT+G +L C+ + S+ RGK+ HA
Sbjct: 243 SWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQ 302
Query: 196 SIRFGYDSHVHVGAALVDMYAKCGNIRLAKYAFDRISHHNLVSFNTMLSGYAMHGLGHNG 375
++ G + VG ALV+MY+KC +++ A+ AFD ++ + ++N ++SGYA N
Sbjct: 303 AVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENI 362
Query: 376 LALFHQMLADGSTPDAITF 432
L +M DG P+ T+
Sbjct: 363 QNLIQKMKGDGFEPNVYTW 381
Score = 64.3 bits (155), Expect = 1e-08
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 17/157 (10%)
Frame = +1
Query: 10 NIYTWNGIVAGLMDNGENEFALKMFSEMQTSETKPDVFTVGMILTICSRLISIERGKQSH 189
N+Y+W I++ +D+G E AL +F ++Q + + F ++L +C L +E G+Q H
Sbjct: 124 NLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGRQLH 183
Query: 190 AYSIR--------------FGYDSHVHVGAALVDMYAKCGNIRLAKYAFDRIS--HHNLV 321
I+ F + V +V Y + GN+ AK FD++ + +
Sbjct: 184 GVVIKRCADMGSALKIFSGFSVKNVVSYNTMIVG-YCENGNVEKAKELFDQMELVGKDTI 242
Query: 322 SFNTMLSGYAMHGLGHNGLALFHQML-ADGSTPDAIT 429
S+N+M+SGYA + L L++F +L +G D+ T
Sbjct: 243 SWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFT 279
>emb|CBI23043.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 192 bits (487), Expect = 3e-47
Identities = 88/145 (60%), Positives = 115/145 (79%)
Frame = +1
Query: 1 FEPNIYTWNGIVAGLMDNGENEFALKMFSEMQTSETKPDVFTVGMILTICSRLISIERGK 180
FEPN+YTWNGI++G ++NG NE AL++F+EMQTS +PD++TVG+IL C+RL +I RGK
Sbjct: 211 FEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGK 270
Query: 181 QSHAYSIRFGYDSHVHVGAALVDMYAKCGNIRLAKYAFDRISHHNLVSFNTMLSGYAMHG 360
Q HA+SIR GY+ VH+GAALVDMYAKCG+I+ A ++RIS+ NLVS N ML+ YAMHG
Sbjct: 271 QVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHG 330
Query: 361 LGHNGLALFHQMLADGSTPDAITFI 435
G G+ALF ML +G PD +TF+
Sbjct: 331 HGDEGIALFRNMLGNGFRPDHVTFL 355
Score = 92.0 bits (227), Expect = 4e-17
Identities = 45/131 (34%), Positives = 74/131 (56%)
Frame = +1
Query: 4 EPNIYTWNGIVAGLMDNGENEFALKMFSEMQTSETKPDVFTVGMILTICSRLISIERGKQ 183
+PN+ +W+ ++ G NG ++ AL++ MQ + +P+ T+ +L C+RL ++ GK+
Sbjct: 8 KPNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNLGKE 67
Query: 184 SHAYSIRFGYDSHVHVGAALVDMYAKCGNIRLAKYAFDRISHHNLVSFNTMLSGYAMHGL 363
H Y R G+ S+ V LVD+Y +C ++ A F S N+VS+NTM+ GY +G
Sbjct: 68 IHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGN 127
Query: 364 GHNGLALFHQM 396
LF QM
Sbjct: 128 VEKAKELFDQM 138
>ref|XP_002515645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545188|gb|EEF46697.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 758
Score = 190 bits (483), Expect = 9e-47
Identities = 86/145 (59%), Positives = 113/145 (77%)
Frame = +1
Query: 1 FEPNIYTWNGIVAGLMDNGENEFALKMFSEMQTSETKPDVFTVGMILTICSRLISIERGK 180
FEPNIYTWNGI+AG ++NG + A+++FSEM T + +PD+FTVG+IL CS+L ++ERGK
Sbjct: 380 FEPNIYTWNGILAGYVENGHLDLAMQLFSEMHTGDVRPDIFTVGIILPACSKLATLERGK 439
Query: 181 QSHAYSIRFGYDSHVHVGAALVDMYAKCGNIRLAKYAFDRISHHNLVSFNTMLSGYAMHG 360
Q HA+SIR YDS VH+GA LVDMYAKCG+++ A+ A+ RIS+HNLV N ML+ YAMHG
Sbjct: 440 QVHAHSIRCYYDSDVHIGAGLVDMYAKCGSLQYAQLAYSRISNHNLVCHNVMLTAYAMHG 499
Query: 361 LGHNGLALFHQMLADGSTPDAITFI 435
G G+ALF + A G PD +TF+
Sbjct: 500 YGEEGIALFRTIRATGFQPDNVTFL 524
Score = 89.4 bits (220), Expect = 3e-16
Identities = 44/138 (31%), Positives = 76/138 (55%)
Frame = +1
Query: 19 TWNGIVAGLMDNGENEFALKMFSEMQTSETKPDVFTVGMILTICSRLISIERGKQSHAYS 198
+WN +++G +DN + AL MF + +PD FT+G +LT C+ S+ +GK+ H+Y+
Sbjct: 250 SWNSMISGYVDNFMFDEALNMFRNLLKEGIEPDSFTLGSVLTACADTASLRQGKEIHSYA 309
Query: 199 IRFGYDSHVHVGAALVDMYAKCGNIRLAKYAFDRISHHNLVSFNTMLSGYAMHGLGHNGL 378
I S+ VG AL++MY+KC + A+ F+ + + ++N ++S YA
Sbjct: 310 IVKSLQSNTFVGGALIEMYSKCQDPMAAQLVFNEVIERDAPTWNVLISCYARCNQNEEIR 369
Query: 379 ALFHQMLADGSTPDAITF 432
L +M DG P+ T+
Sbjct: 370 NLLQKMQEDGFEPNIYTW 387
Score = 62.0 bits (149), Expect = 5e-08
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 18/158 (11%)
Frame = +1
Query: 10 NIYTWNGIVAGLMDNGENEFALKMFSEMQTSETKPDVFTVGMILTICSRLISIERGKQSH 189
N+++W I+ D+G + A +F E+ + + + F ++ ICS L +E G+Q H
Sbjct: 129 NLHSWLAILNVYFDHGLFDEAFSLFQELLFEDIELEFFAFPLVFKICSGLGMVELGRQLH 188
Query: 190 AYSI--------------RFGYDSHVHVGAALVDMYAKCGNIRLAKYAFDRIS----HHN 315
A + RF + V +V Y G++ AK FD++
Sbjct: 189 AMVMKRCGDMDNAVKIFSRFSLRNEVSYNTMIVG-YCAIGDVSKAKEFFDQMEVSGVKRE 247
Query: 316 LVSFNTMLSGYAMHGLGHNGLALFHQMLADGSTPDAIT 429
+S+N+M+SGY + + L +F +L +G PD+ T
Sbjct: 248 RISWNSMISGYVDNFMFDEALNMFRNLLKEGIEPDSFT 285
>ref|XP_002317794.1| predicted protein [Populus trichocarpa] gi|222858467|gb|EEE96014.1|
predicted protein [Populus trichocarpa]
Length = 852
Score = 185 bits (470), Expect = 3e-45
Identities = 84/145 (57%), Positives = 116/145 (80%)
Frame = +1
Query: 1 FEPNIYTWNGIVAGLMDNGENEFALKMFSEMQTSETKPDVFTVGMILTICSRLISIERGK 180
+ PNIYTWN I+AGL++N + + +++FSEMQ S+ +PD++TVG+IL CSRL ++ERGK
Sbjct: 531 YHPNIYTWNSILAGLVENRQLDLTMQLFSEMQISKLRPDIYTVGIILPACSRLATLERGK 590
Query: 181 QSHAYSIRFGYDSHVHVGAALVDMYAKCGNIRLAKYAFDRISHHNLVSFNTMLSGYAMHG 360
Q+HA+SI+ GYD+ VH+GAALVDMYAKCG+++ A+ A+DRIS+ NLVS N ML+ AMHG
Sbjct: 591 QAHAHSIKCGYDTDVHIGAALVDMYAKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHG 650
Query: 361 LGHNGLALFHQMLADGSTPDAITFI 435
G G++LF MLA G PD +TF+
Sbjct: 651 HGEEGISLFQTMLALGFIPDHVTFL 675
Score = 96.3 bits (238), Expect = 2e-18
Identities = 51/144 (35%), Positives = 80/144 (55%), Gaps = 1/144 (0%)
Frame = +1
Query: 4 EPNIYTWNGIVAGLMDNGENEFALKMFSEMQTSE-TKPDVFTVGMILTICSRLISIERGK 180
E + +WN I++G + N + A MF M E +PD FT+G +LT C+ IS+ +GK
Sbjct: 395 ERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGK 454
Query: 181 QSHAYSIRFGYDSHVHVGAALVDMYAKCGNIRLAKYAFDRISHHNLVSFNTMLSGYAMHG 360
+ HA +I G S VG ALV+MY+KC ++ A+ AFD + ++ ++N ++SGY
Sbjct: 455 EIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKDVPTWNALISGYTRSN 514
Query: 361 LGHNGLALFHQMLADGSTPDAITF 432
L +M DG P+ T+
Sbjct: 515 QIERIQYLLEKMKGDGYHPNIYTW 538
Score = 85.1 bits (209), Expect = 5e-15
Identities = 43/118 (36%), Positives = 67/118 (56%)
Frame = +1
Query: 7 PNIYTWNGIVAGLMDNGENEFALKMFSEMQTSETKPDVFTVGMILTICSRLISIERGKQS 186
PN+ +W+ ++ G NG +E A++M MQ P+ T+ +L C+RL ++ GKQ
Sbjct: 260 PNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQL 319
Query: 187 HAYSIRFGYDSHVHVGAALVDMYAKCGNIRLAKYAFDRISHHNLVSFNTMLSGYAMHG 360
H Y R + S+ V ALVD+Y +CG++ A F + S N++S NTM+ GY G
Sbjct: 320 HGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESG 377
Score = 81.6 bits (200), Expect = 6e-14
Identities = 41/142 (28%), Positives = 81/142 (57%), Gaps = 1/142 (0%)
Frame = +1
Query: 10 NIYTWNGIVAGLMDNGENEFALKMFSEMQTSETKPDVFTVGMILTICSRLISIERGKQSH 189
N+++W I++ +D+G E A +F +Q + D F ++ CS L S+E G+Q H
Sbjct: 124 NLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLH 183
Query: 190 AYSIRFGYDSHVHVGAALVDMYAKCGNIRLAKYAFDRISHHNLVSFNTMLSGYAMHGLGH 369
I+F + +++V AL+DMY KCG++ AK ++ + V++N++++ A +G+ +
Sbjct: 184 GLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVY 243
Query: 370 NGLALFHQMLA-DGSTPDAITF 432
L +M + D S P+ +++
Sbjct: 244 EALEFLEKMKSLDYSMPNVVSW 265
Score = 61.2 bits (147), Expect = 8e-08
Identities = 31/86 (36%), Positives = 47/86 (54%)
Frame = +1
Query: 175 GKQSHAYSIRFGYDSHVHVGAALVDMYAKCGNIRLAKYAFDRISHHNLVSFNTMLSGYAM 354
GKQ HA++I+ G+D+ + L+ MYA+CG ++ A + F+ + NL S+ +LS Y
Sbjct: 78 GKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLFETMPMRNLHSWKAILSVYLD 137
Query: 355 HGLGHNGLALFHQMLADGSTPDAITF 432
HGL LF + DG D F
Sbjct: 138 HGLFEEAFLLFQVLQFDGVELDFFVF 163
>ref|XP_003544342.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 551
Score = 183 bits (465), Expect = 1e-44
Identities = 83/145 (57%), Positives = 113/145 (77%)
Frame = +1
Query: 1 FEPNIYTWNGIVAGLMDNGENEFALKMFSEMQTSETKPDVFTVGMILTICSRLISIERGK 180
FEPN+YTWNGI+AG ++N + + A+++F+EMQ + +PD++TVG+IL CSRL +I+RGK
Sbjct: 366 FEPNVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGK 425
Query: 181 QSHAYSIRFGYDSHVHVGAALVDMYAKCGNIRLAKYAFDRISHHNLVSFNTMLSGYAMHG 360
Q HAYSIR G+DS VH+GAALVDMYAKCG+++ ++ IS+ NLVS N ML+ YAMHG
Sbjct: 426 QVHAYSIRAGHDSDVHIGAALVDMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHG 485
Query: 361 LGHNGLALFHQMLADGSTPDAITFI 435
G G+ALF +MLA PD +TF+
Sbjct: 486 HGEEGIALFRRMLASKVRPDHVTFL 510
Score = 97.8 bits (242), Expect = 8e-19
Identities = 49/138 (35%), Positives = 81/138 (58%)
Frame = +1
Query: 19 TWNGIVAGLMDNGENEFALKMFSEMQTSETKPDVFTVGMILTICSRLISIERGKQSHAYS 198
+WN +++G +D + A +F ++ +PD FT+G +L C+ + SI RGK++H+ +
Sbjct: 236 SWNSMISGYVDGSLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHSLA 295
Query: 199 IRFGYDSHVHVGAALVDMYAKCGNIRLAKYAFDRISHHNLVSFNTMLSGYAMHGLGHNGL 378
I G S+ VG ALV+MY+KC +I A+ AFD +S +L ++N ++SGYA
Sbjct: 296 IVRGLQSNSIVGGALVEMYSKCQDIVAAQMAFDGVSERDLPTWNALISGYARCNQAEKIR 355
Query: 379 ALFHQMLADGSTPDAITF 432
L +M DG P+ T+
Sbjct: 356 ELHQKMRRDGFEPNVYTW 373
Score = 60.8 bits (146), Expect = 1e-07
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 20/160 (12%)
Frame = +1
Query: 10 NIYTWNGIVAGLMDNGENEFALKMFSEM--QTSETKPDVFTVGMILTICSRLISIERGKQ 183
N+++W ++ ++ G E A +F ++ + + D F ++L IC L ++E G+Q
Sbjct: 113 NLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFFVFPVVLKICCGLCAVELGRQ 172
Query: 184 SHAYSI--------------RFGYDSHVHVGAALVDMYAKCGNIRLAKYAFDRISHHNL- 318
H ++ RF S A + Y + GN+ AK FDR+ +
Sbjct: 173 MHGMALKHDGDMKSAFEMFSRFSRKSAASYNAMIAG-YWENGNLFKAKELFDRMEQEGVQ 231
Query: 319 ---VSFNTMLSGYAMHGLGHNGLALFHQMLADGSTPDAIT 429
+S+N+M+SGY L +LF +L +G PD+ T
Sbjct: 232 KDRISWNSMISGYVDGSLFDEAYSLFRDLLKEGIEPDSFT 271