BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038183
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001062556.1| Os09g0103500 [Oryza sativa Japonica Group] g...    82   5e-14
gb|EEE69173.1| hypothetical protein OsJ_28343 [Oryza sativa Japo...    82   5e-14
gb|EEC84066.1| hypothetical protein OsI_30347 [Oryza sativa Indi...    82   5e-14
dbj|BAK06727.1| predicted protein [Hordeum vulgare subsp. vulgare]     80   2e-13
ref|XP_002459881.1| hypothetical protein SORBIDRAFT_02g012960 [S...    80   2e-13

>ref|NP_001062556.1| Os09g0103500 [Oryza sativa Japonica Group]
           gi|75117672|sp|Q69K07.1|PUS4_ORYSJ RecName: Full=RNA
           pseudourine synthase 4, mitochondrial; AltName: Full=RNA
           pseudouridylate synthase 4; AltName: Full=RNA-uridine
           isomerase 4; Flags: Precursor
           gi|50725212|dbj|BAD34146.1| ribosomal large subunit
           pseudouridine synthase C-like [Oryza sativa Japonica
           Group] gi|51091882|dbj|BAD36694.1| ribosomal large
           subunit pseudouridine synthase C-like [Oryza sativa
           Japonica Group] gi|113630789|dbj|BAF24470.1|
           Os09g0103500 [Oryza sativa Japonica Group]
          Length = 448

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 45/99 (45%), Positives = 67/99 (67%), Gaps = 3/99 (3%)
 Frame = -1

Query: 298 GERA-AKWLSLPPFSPPIDSSLISKEIA--GQASLEKREPITALKWVRRCCPELPMSLVQ 128
           GER  + WL LPPF+P +D++  ++ I+  G    +  +  TA+KWVRRCCP+LP SLVQ
Sbjct: 45  GERGKSPWLQLPPFAP-LDAAAAARAISRGGGEGGDGEQGATAIKWVRRCCPDLPTSLVQ 103

Query: 127 KLFRLRQVRKQSTIPKGTIIENNAGEKQIRRVSAKVPLV 11
           KLFRLR+V+K     + +  + +A + ++RRVSAK  L+
Sbjct: 104 KLFRLRKVKKNVVTAEISSADASAEQHRLRRVSAKDQLM 142


>gb|EEE69173.1| hypothetical protein OsJ_28343 [Oryza sativa Japonica Group]
          Length = 465

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 45/99 (45%), Positives = 67/99 (67%), Gaps = 3/99 (3%)
 Frame = -1

Query: 298 GERA-AKWLSLPPFSPPIDSSLISKEIA--GQASLEKREPITALKWVRRCCPELPMSLVQ 128
           GER  + WL LPPF+P +D++  ++ I+  G    +  +  TA+KWVRRCCP+LP SLVQ
Sbjct: 45  GERGKSPWLQLPPFAP-LDAAAAARAISRGGGEGGDGEQGATAIKWVRRCCPDLPTSLVQ 103

Query: 127 KLFRLRQVRKQSTIPKGTIIENNAGEKQIRRVSAKVPLV 11
           KLFRLR+V+K     + +  + +A + ++RRVSAK  L+
Sbjct: 104 KLFRLRKVKKNVVTAEISSADASAEQHRLRRVSAKDQLM 142


>gb|EEC84066.1| hypothetical protein OsI_30347 [Oryza sativa Indica Group]
          Length = 465

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 45/99 (45%), Positives = 67/99 (67%), Gaps = 3/99 (3%)
 Frame = -1

Query: 298 GERA-AKWLSLPPFSPPIDSSLISKEIA--GQASLEKREPITALKWVRRCCPELPMSLVQ 128
           GER  + WL LPPF+P +D++  ++ I+  G    +  +  TA+KWVRRCCP+LP SLVQ
Sbjct: 45  GERGKSPWLQLPPFAP-LDAAAAARAISRGGGEGGDGEQGATAIKWVRRCCPDLPTSLVQ 103

Query: 127 KLFRLRQVRKQSTIPKGTIIENNAGEKQIRRVSAKVPLV 11
           KLFRLR+V+K     + +  + +A + ++RRVSAK  L+
Sbjct: 104 KLFRLRKVKKNVVTAEISSADASAEQHRLRRVSAKDQLM 142


>dbj|BAK06727.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 472

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/90 (44%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
 Frame = -1

Query: 283 KWLSLPPFSPPIDSSLISKEI---AGQASLEKREPITALKWVRRCCPELPMSLVQKLFRL 113
           +W+ LPPF+P +D++  ++ I    G   +E     TA++WVRRCCP+LP SLVQKLFRL
Sbjct: 57  RWMELPPFAP-VDAAAAARAIFRGQGGDEIEGSSNSTAIRWVRRCCPDLPASLVQKLFRL 115

Query: 112 RQVRKQSTIPKGTIIENNAGEKQIRRVSAK 23
           R+V+K +   + +    +A + ++RRVSAK
Sbjct: 116 RKVKKNAVTAETSSTHASAEQFRLRRVSAK 145


>ref|XP_002459881.1| hypothetical protein SORBIDRAFT_02g012960 [Sorghum bicolor]
           gi|241923258|gb|EER96402.1| hypothetical protein
           SORBIDRAFT_02g012960 [Sorghum bicolor]
          Length = 246

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
 Frame = -1

Query: 295 ERAAKWLSLPPFSPPIDSSLISKEI-AGQASLEKREPITALKWVRRCCPELPMSLVQKLF 119
           E   +W+ LPPF+P +D++  ++ I  G      R   TA++WVRRCCP LP SLVQKLF
Sbjct: 54  ENKKRWVELPPFAP-LDANAAARAIYRGDNGEGSRSNSTAIRWVRRCCPHLPASLVQKLF 112

Query: 118 RLRQVRKQSTIPKGTIIENNAGEKQIRRVSAKVPLV 11
           RLR+V+K       +  ++ A + ++RRVSAK  LV
Sbjct: 113 RLRKVKKNLVTADTSSTDSIAQQLRLRRVSAKDELV 148