BLASTX nr result

ID: Dioscorea21_contig00038175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038175
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21278.3| unnamed protein product [Vitis vinifera]               85   7e-15
ref|XP_003564985.1| PREDICTED: uncharacterized protein LOC100833...    77   1e-12
ref|XP_002334749.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
dbj|BAJ99548.1| predicted protein [Hordeum vulgare subsp. vulgare]     71   1e-10
ref|XP_002314476.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10

>emb|CBI21278.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 42/111 (37%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
 Frame = +3

Query: 75  DPVKRAAFDAKRNGTYYCGKNGGTVPLLEDGHQKSNCIANQIDYYDFRNIRKPDLFSVGQ 254
           D  ++     +R+    C K   TV   +  +  S+ + +   +Y+F  IRKP LF+VGQ
Sbjct: 236 DEQRKVTCTQERSMISACVKRRITVGTEKTANSMSSSVVSDF-FYNFEYIRKPQLFTVGQ 294

Query: 255 VWVVYDEENRPRRYAQIDSIHP-GFQMQVRWFQPCPESMFEKLWCNSGLPV 404
           VW  YD+EN PR+YA+I+SI+   F++ + W  P P +  E+ WC  GLPV
Sbjct: 295 VWATYDDENMPRKYARINSIYKFPFRLHISWLIPAPVTAHERRWCEVGLPV 345


>ref|XP_003564985.1| PREDICTED: uncharacterized protein LOC100833870 [Brachypodium
           distachyon]
          Length = 780

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
 Frame = +3

Query: 162 DGHQKSNCIANQIDYYDFRNIRKPDLFSVGQVWVVYDEENRPRRYAQIDSI-HPGFQMQV 338
           D +Q  +C + Q DY++F + R  + F+ GQ+W  YD E  PRRYA I+ +     Q+ V
Sbjct: 286 DANQDDHCFSKQYDYHNFEDDRSIEHFTNGQIWAAYDWEKFPRRYAWINKVLTDKMQLYV 345

Query: 339 RWFQPCPESMFEKLWCNSGLP 401
            WF+PCP+S  E+ W N+ LP
Sbjct: 346 SWFKPCPQSHEEEKWLNASLP 366


>ref|XP_002334749.1| predicted protein [Populus trichocarpa] gi|222874714|gb|EEF11845.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 41/103 (39%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
 Frame = +3

Query: 123 YCGKNGGT-VPLLEDGHQKSNCIANQIDY-----YDFRNIRKPDLFSVGQVWVVYDE-EN 281
           +C KN  T + L  D   +S    +  DY     +DF   R  + FSVGQVW VYD  + 
Sbjct: 408 FCQKNSETPIRLSSDSTSQSASDPDSYDYPDPDFHDFDKDRGGECFSVGQVWAVYDTLDA 467

Query: 282 RPRRYAQIDSI-HPGFQMQVRWFQPCPESMFEKLWCNSGLPVA 407
            PR YAQI  +  PGF +++ W + CP+   E  W   GLPVA
Sbjct: 468 MPRFYAQIKKVVSPGFNLRITWLEACPDDQNEAEWVEEGLPVA 510


>dbj|BAJ99548.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 748

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
 Frame = +3

Query: 156 LEDGHQKSNCIANQIDYYDFRNIRKPDLFSVGQVWVVYDEENRPRRYAQIDSI-HPGFQM 332
           L D  Q   C + Q D+++F   R    F+ GQ+W  YD E  PRRYA+I+ +     Q+
Sbjct: 257 LSDAIQDDPCSSQQYDHHNFEEDRSIHQFATGQIWAGYDWEKFPRRYARINKVLTDKMQL 316

Query: 333 QVRWFQPCPESMFEKLWCNSGLP 401
            V WF+PCP+S  EK W  + LP
Sbjct: 317 YVSWFKPCPQSHEEKEWLIASLP 339


>ref|XP_002314476.1| predicted protein [Populus trichocarpa] gi|222863516|gb|EEF00647.1|
           predicted protein [Populus trichocarpa]
          Length = 866

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
 Frame = +3

Query: 201 DYYDFRNIRKPDLFSVGQVWVVYDE-ENRPRRYAQIDSI-HPGFQMQVRWFQPCPESMFE 374
           D++DF   R  + FSVGQVW VYD  +  PR YAQI  +  PGF +++ W + CP+   E
Sbjct: 389 DFHDFDKDRGGECFSVGQVWAVYDTLDAMPRFYAQIKKVVSPGFNLRITWLEACPDDQNE 448

Query: 375 KLWCNSGLPVA 407
             W   GLPVA
Sbjct: 449 AEWVEEGLPVA 459


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