BLASTX nr result

ID: Dioscorea21_contig00038170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038170
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001059061.1| Os07g0184900 [Oryza sativa Japonica Group] g...   134   1e-29
dbj|BAC83190.1| putative DNA-dependent protein kinase 70 kda DNA...   134   1e-29
gb|EEC81629.1| hypothetical protein OsI_25158 [Oryza sativa Indi...   134   1e-29
ref|XP_002461302.1| hypothetical protein SORBIDRAFT_02g000480 [S...   131   5e-29
tpg|DAA42529.1| TPA: hypothetical protein ZEAMMB73_363757 [Zea m...   131   7e-29

>ref|NP_001059061.1| Os07g0184900 [Oryza sativa Japonica Group]
           gi|75139246|sp|Q7F1M0.1|KU70_ORYSJ RecName:
           Full=ATP-dependent DNA helicase 2 subunit KU70;
           Short=OsKU70; AltName: Full=ATP-dependent DNA helicase 2
           subunit 1; AltName: Full=ATP-dependent DNA helicase II
           70 kDa subunit gi|34393279|dbj|BAC83189.1| putative
           ATP-dependent DNA helicase II 70 kDa subunit [Oryza
           sativa Japonica Group] gi|113610597|dbj|BAF20975.1|
           Os07g0184900 [Oryza sativa Japonica Group]
           gi|215717008|dbj|BAG95371.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 624

 Score =  134 bits (336), Expect = 1e-29
 Identities = 66/103 (64%), Positives = 81/103 (78%)
 Frame = +2

Query: 71  MNLDPHGLFRDHSDSDDEFELEKENDPSKEMVVYLIDASPKMFDLVGNDEDKSRTYFHAA 250
           M+LDP GLFRD SD DD+   E+E   +KEMVVYLIDASPKMF      ++K  T+FH  
Sbjct: 1   MDLDPEGLFRDDSDEDDDNVQERE--ANKEMVVYLIDASPKMFTPATKADEKEETHFHTI 58

Query: 251 ISSISQSLKTQIIGKSYDEVAICFFNTKEKKNLQDLNGVFVFN 379
           ++ I+ +LKTQIIG+SYDEVAICFFNTKEKKNLQ+L GV+V+N
Sbjct: 59  VNCITHALKTQIIGRSYDEVAICFFNTKEKKNLQELAGVYVYN 101


>dbj|BAC83190.1| putative DNA-dependent protein kinase 70 kda DNA-binding subunit
           Ku70 [Oryza sativa Japonica Group]
          Length = 331

 Score =  134 bits (336), Expect = 1e-29
 Identities = 66/103 (64%), Positives = 81/103 (78%)
 Frame = +2

Query: 71  MNLDPHGLFRDHSDSDDEFELEKENDPSKEMVVYLIDASPKMFDLVGNDEDKSRTYFHAA 250
           M+LDP GLFRD SD DD+   E+E   +KEMVVYLIDASPKMF      ++K  T+FH  
Sbjct: 1   MDLDPEGLFRDDSDEDDDNVQERE--ANKEMVVYLIDASPKMFTPATKADEKEETHFHTI 58

Query: 251 ISSISQSLKTQIIGKSYDEVAICFFNTKEKKNLQDLNGVFVFN 379
           ++ I+ +LKTQIIG+SYDEVAICFFNTKEKKNLQ+L GV+V+N
Sbjct: 59  VNCITHALKTQIIGRSYDEVAICFFNTKEKKNLQELAGVYVYN 101


>gb|EEC81629.1| hypothetical protein OsI_25158 [Oryza sativa Indica Group]
          Length = 433

 Score =  134 bits (336), Expect = 1e-29
 Identities = 66/103 (64%), Positives = 81/103 (78%)
 Frame = +2

Query: 71  MNLDPHGLFRDHSDSDDEFELEKENDPSKEMVVYLIDASPKMFDLVGNDEDKSRTYFHAA 250
           M+LDP GLFRD SD DD+   E+E   +KEMVVYLIDASPKMF      ++K  T+FH  
Sbjct: 1   MDLDPEGLFRDDSDEDDDNVQERE--ANKEMVVYLIDASPKMFTPATKADEKEETHFHTI 58

Query: 251 ISSISQSLKTQIIGKSYDEVAICFFNTKEKKNLQDLNGVFVFN 379
           ++ I+ +LKTQIIG+SYDEVAICFFNTKEKKNLQ+L GV+V+N
Sbjct: 59  VNCITHALKTQIIGRSYDEVAICFFNTKEKKNLQELAGVYVYN 101


>ref|XP_002461302.1| hypothetical protein SORBIDRAFT_02g000480 [Sorghum bicolor]
           gi|241924679|gb|EER97823.1| hypothetical protein
           SORBIDRAFT_02g000480 [Sorghum bicolor]
          Length = 628

 Score =  131 bits (330), Expect = 5e-29
 Identities = 65/104 (62%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
 Frame = +2

Query: 71  MNLDPHGLFRDHSDSDDEFELEKENDPSKEMVVYLIDASPKMFD-LVGNDEDKSRTYFHA 247
           M+LDP G+FRD SD D++   E+E   +K+MVVYL+DASPKMF      D +K  TYFH 
Sbjct: 1   MDLDPEGIFRDDSDEDEDNVQERE--ANKDMVVYLVDASPKMFTPATTQDNEKQETYFHT 58

Query: 248 AISSISQSLKTQIIGKSYDEVAICFFNTKEKKNLQDLNGVFVFN 379
            ++ I++SLKTQIIG+SYDEVAICFFNTKEKKNLQD  GV+V+N
Sbjct: 59  IVNCITESLKTQIIGRSYDEVAICFFNTKEKKNLQDSAGVYVYN 102


>tpg|DAA42529.1| TPA: hypothetical protein ZEAMMB73_363757 [Zea mays]
          Length = 907

 Score =  131 bits (329), Expect = 7e-29
 Identities = 65/104 (62%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
 Frame = +2

Query: 71  MNLDPHGLFRDHSDSDDEFELEKENDPSKEMVVYLIDASPKMFD-LVGNDEDKSRTYFHA 247
           M+LDP G+FRD SD D++   E+E   +KEMVVYL+DASPKMF      D +K  T+FH 
Sbjct: 1   MDLDPEGIFRDDSDEDEDSVQERE--ANKEMVVYLVDASPKMFTPATTQDNEKQETHFHT 58

Query: 248 AISSISQSLKTQIIGKSYDEVAICFFNTKEKKNLQDLNGVFVFN 379
            ++ I++SLKTQIIG+SYDEVAICFFNTKEKKNLQD  GV+V+N
Sbjct: 59  IVNCITESLKTQIIGRSYDEVAICFFNTKEKKNLQDSAGVYVYN 102


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