BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00038070
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637626.1| Pentatricopeptide repeat-containing protein ...   152   3e-35
ref|XP_003637381.1| Pentatricopeptide repeat-containing protein ...   152   3e-35
sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-c...   115   3e-24
ref|NP_196981.1| pentatricopeptide repeat-containing protein [Ar...   115   3e-24
ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containi...   114   8e-24

>ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503561|gb|AES84764.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/149 (50%), Positives = 107/149 (71%), Gaps = 3/149 (2%)
 Frame = -2

Query: 440 PSKSHLYSSFFCTLIQTFLSCYRFTQARNSFLFMRSLGLNPTVHQWNHLLFRFNASGLVS 261
           P+K+HLY SFFCTLI+ +L+  RF+ A  +F  MR+LGL PT+  WN LL++FNASGLVS
Sbjct: 52  PTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVS 111

Query: 260 EVPNVYSELIKCHQSSNLFARNVLIHAFCKMRMLDMALEVVRDGEA---DVVSYNTVIWG 90
           +V  +YS+++ C    ++F+ NVL+H+ CK+  LD+AL  +R+ +    D V+YNTVIWG
Sbjct: 112 QVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWG 171

Query: 89  FCDNGMVTSAVGFLSEMFKRGVGMNTISC 3
           FC  G+V    G LSEM KRG+  ++I+C
Sbjct: 172 FCQKGLVDQGFGLLSEMVKRGLCFDSITC 200


>ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503316|gb|AES84519.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/149 (50%), Positives = 107/149 (71%), Gaps = 3/149 (2%)
 Frame = -2

Query: 440 PSKSHLYSSFFCTLIQTFLSCYRFTQARNSFLFMRSLGLNPTVHQWNHLLFRFNASGLVS 261
           P+K+HLY SFFCTLI+ +L+  RF+ A  +F  MR+LGL PT+  WN LL++FNASGLVS
Sbjct: 52  PTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVS 111

Query: 260 EVPNVYSELIKCHQSSNLFARNVLIHAFCKMRMLDMALEVVRDGEA---DVVSYNTVIWG 90
           +V  +YS+++ C    ++F+ NVL+H+ CK+  LD+AL  +R+ +    D V+YNTVIWG
Sbjct: 112 QVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWG 171

Query: 89  FCDNGMVTSAVGFLSEMFKRGVGMNTISC 3
           FC  G+V    G LSEM KRG+  ++I+C
Sbjct: 172 FCQKGLVDQGFGLLSEMVKRGLCFDSITC 200


>sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g14770, mitochondrial; Flags: Precursor
          Length = 940

 Score =  115 bits (289), Expect = 3e-24
 Identities = 62/149 (41%), Positives = 92/149 (61%), Gaps = 3/149 (2%)
 Frame = -2

Query: 443 SPSKSHLYSSFFCTLIQTFLSCYRFTQARNSFLFMRSLGLNPTVHQWNHLLFRFNASGLV 264
           +P K+ +Y S F TL + +LSC R   A  +   M + G+ P    WN L+ +FN +GLV
Sbjct: 52  APIKTRVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLV 111

Query: 263 -SEVPNVYSELIKCHQSSNLFARNVLIHAFCKMRMLDMALEVVRDG--EADVVSYNTVIW 93
             +V  +YS++I C  S ++FA NVLIH+FCK+  L  A+ ++R+     D V+YNTVI 
Sbjct: 112 HDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVIS 171

Query: 92  GFCDNGMVTSAVGFLSEMFKRGVGMNTIS 6
           G C++G+   A  FLSEM K G+  +T+S
Sbjct: 172 GLCEHGLADEAYQFLSEMVKMGILPDTVS 200


>ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis
           thaliana] gi|332004692|gb|AED92075.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 938

 Score =  115 bits (289), Expect = 3e-24
 Identities = 62/149 (41%), Positives = 92/149 (61%), Gaps = 3/149 (2%)
 Frame = -2

Query: 443 SPSKSHLYSSFFCTLIQTFLSCYRFTQARNSFLFMRSLGLNPTVHQWNHLLFRFNASGLV 264
           +P K+ +Y S F TL + +LSC R   A  +   M + G+ P    WN L+ +FN +GLV
Sbjct: 50  APIKTRVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLV 109

Query: 263 -SEVPNVYSELIKCHQSSNLFARNVLIHAFCKMRMLDMALEVVRDG--EADVVSYNTVIW 93
             +V  +YS++I C  S ++FA NVLIH+FCK+  L  A+ ++R+     D V+YNTVI 
Sbjct: 110 HDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVIS 169

Query: 92  GFCDNGMVTSAVGFLSEMFKRGVGMNTIS 6
           G C++G+   A  FLSEM K G+  +T+S
Sbjct: 170 GLCEHGLADEAYQFLSEMVKMGILPDTVS 198


>ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/113 (46%), Positives = 77/113 (68%)
 Frame = -2

Query: 341 MRSLGLNPTVHQWNHLLFRFNASGLVSEVPNVYSELIKCHQSSNLFARNVLIHAFCKMRM 162
           MR+L L P++  WN LL+ FNASG VS+V  +YSE++ C    N+F+ N+L+H+ CK+  
Sbjct: 1   MRALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGD 60

Query: 161 LDMALEVVRDGEADVVSYNTVIWGFCDNGMVTSAVGFLSEMFKRGVGMNTISC 3
           L +AL  +R+   D V+YNTV+WGFC  G+     G LSEM K+GV  ++++C
Sbjct: 61  LGLALGYLRNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTC 113